G2046935


Basic Information

Item Value
gene id G2046935
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7505719 ~ 7510925 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2341444
ggaagatatCGAAAGATAGAACATTAGCGAGAGTGGAGACGTTTCTGGTGGCAAACATCTAAAGACAATGCATTAAGAAAGGACAGACACGCCAACACGAATCAAGTGACTGACAGAACATTCacggaaagggggagaggagagaggcggaCATCCAGGATTAAAGCCGGGCAATTCAGCGATGGAGGAGGCCAAAGTCAGCTCTGTGGCGATCGGGGTGGCTGTGGGATGCACCTTCCTTGCTCTCCTCATCGTCATCGGCATTGTGCAGTTCTGCTGCAATCGATCCTGCAAGAAATGCAGGAAACGCTGCAAGAGAAATGaggcaTCACTGAAAGAAAAAGTGCTTACGAAGTTTGGCCAAAAGAagtctccccctcccttctccatcaGTGGCTGTTTGAAGTAGAGGACCTGCAACACACAGGAGAACATTTCTGTTGATTacgttctctttctttctccctctcttgctctctgatATTGATCTAACAGTCATGTATTTGAACGTAATACTCTGTCTCCTGTGAATATAGTGCAGTATGTCTCTGTAGAGGGGGTTATAGAAGTTATAGAAGCGGGCCAGCAACAACCGGAGGGCTGCCACATACTGCTAATGTTCCTTTGGAACTTAACCCCCTAAACTGTTATTTTGGGCTATGCACTGCCGGTGCCCTTTCCTCCAGCCTCTCCAACCGTGTGTATATACAATGacttaaagtattcagaccacttgactctccacattttgttacattacagccttatccaAAAATGTATTAATTAGTTTGTTtactcctcaatctacacacaacgccccataatgacaaagcaaaaacaggtttttatgggaatcttttttttaattacaaataaaaacctgaaatatcacatttacataagattTCAGATCCTTTAcacaatactttgttgaagcaccttcagcagcaattacagcatcgagtcttctttggtataaCGCTACAAGTTTGGGACATCTGTATTTGGagagcttctcccattcttttttgcagatcctctcaagctctgtcaggttggatgggggagcGTTGATGcattttttcaggtctctccagagatgtttcgaTCTGGTTCAACTctgggctcttgctgggccactcaaggacattcggagacttgtccgatgccactcctgcattgtattggctgtgtgcttagagtcattgtcctattggaaggtgaacctttgccccagtctgagatcctgagcggtctggagcaggttttcatcaaggatctcgctgtacttttctctgttaatctttgcctcgatcctgactagtcccctagtccctgctgctgtaaaacatccccacagcatgatgctgcatcaccatgcttcaccatagggatggtgccaggtttccttcaaacgtgatgcttggcattcaggccaaagagctcaatcctggtttcatcagaccagataatcttgtttctcatggtctgagagtcttaagcggactgtcatgtggtttccgtctggccagtctaccataaaggcctgattggtggagtgctgcagagacggttgtccatctggaagattctcccatctccacagaggaactctagagttctgtcagagtgaccattgggttcttggtcacctccctgaccatggcccttctccctcgattgctcagtttggtcgggctctaggaagagtcttggtggttaccaacttcttccatttaagaatgtcggaggccactgtgttcttggggaccttcaatgctgcagacattttttggtacccttccccagatctgtgcattgacaccatcctgtctcggagatctacggacaattccttcgacctcatggcttggtttttgctctgacatgcactgtcaactgtgggaccttatatagacaggtgtgagcctttccaaatcatgtccaatcaattgaatttaccacaggtcgaCTTCTGTCCTCAACaactcaatgatgatcaatggaaacaggatgcacctgagctcaatttcgagactcatagcaaagggtctgaatacttatgtaaagaaggTATTTCTGATTTTTATTTTGCTGAggatttaattaaaaaaaaaaatacattttagaataaggctataaaaaaaaagtcaagaggtctagCCTCCCGattggtgcagcggtctaagacactacatcgcagtgctagaggcgtcactacaagtccgggtttgatcccgggctgtgtcgcagcaggccgcgaccgggagacccaaaTGTCTATCTCGTGTGGACCAATAAAATGTATCTTTGTGTCCCATGAGTATGTCACTGTAGGCTGATGCAGAGTAATGGAGGAGCGTGTGTTTTAAAGTATGGCTCTGGTACGCTCACATAAGACGGAGCATATCAGTTATTTCAACGTTtctaatgctctctctctctcactcatatcTCACCACACAAACCTCAAACAACTCACTCTCTCTTCCGGCCCACGTTTAAACATGAGAACGAATGGCGGGTTAGGGTGTCTCTATAGATTGCGGAAAACACGGAGAAGTGTGAGAGAGGATTGTTGTGGAGGAAAGAGTACTGATGACGAAAAGGAGAATGGCGCCTTGGCGGCTAGTCAACAAGCTAACCACAGAAACTCGCACATCATCTTTCTCATAAGCTGGAGGGCAGCACCCTCATGGCTGCTCTACAGGTCACAGATAGGGCCTATAGGCGTACCACCAGGGCGATGTGTCACAGTATGTAGAAATTgtattccatatgtttgatacatGTGAAATGACAGTTAAAATTCAGCATGTGAGGACTACATTCATTCTGGTAATGTCAAAGTGTCTTCTTGATTTTAGTGAGAAAGTGCAAataggaaagggggatacctagtcagttgtacaactgaatgccatCAACTGAAATGTATGTTCCAAATACCTGTACTCAATTCTGATCTTTTCTATTTCAATAAAACTAGGATATAATGTGT

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2341444 True 3001 TUCP 0.45 6 7505719 7510925

Neighbor

gene id symbol gene type direction distance location
LOC110507060 LOC106612728 coding downstream 22337 7470133 ~ 7483382 (-)
fxyd6 fxyd6 coding downstream 37159 7442657 ~ 7468560 (-)
LOC110507442 LOC106612730 coding downstream 63481 7436104 ~ 7442238 (-)
LOC110507059 dscaml1 coding downstream 94018 7182085 ~ 7411701 (-)
LOC110507441 LOC106612399 coding downstream 279967 7218620 ~ 7225752 (-)
LOC110507447 scn4b coding upstream 20656 7531581 ~ 7569130 (-)
scn2b scn2b coding upstream 63878 7574803 ~ 7605568 (-)
LOC110507449 LOC106580720 coding upstream 292730 7803655 ~ 7904639 (-)
LOC110507451 NA coding upstream 688036 8198961 ~ 8213314 (-)
LOC110507453 LOC106580722 coding upstream 749575 8260500 ~ 8264130 (-)
G2046923 NA non-coding downstream 82535 7422637 ~ 7423184 (-)
G2046922 NA non-coding downstream 83185 7422277 ~ 7422534 (-)
G2046775 NA non-coding downstream 255582 7249722 ~ 7250137 (-)
G2046785 NA non-coding downstream 353280 7151267 ~ 7152439 (-)
G2046958 NA non-coding upstream 1396 7512321 ~ 7512723 (-)
G2046959 NA non-coding upstream 2061 7512986 ~ 7513348 (-)
G2046961 NA non-coding upstream 2846 7513771 ~ 7513982 (-)
G2046962 NA non-coding upstream 3193 7514118 ~ 7514373 (-)
LOC110507058 egln2 other downstream 477484 6992367 ~ 7028249 (-)
LOC110507418 NA other downstream 998138 6501784 ~ 6512110 (-)
LOC110507421 gemin7 other downstream 1014600 6489704 ~ 6491119 (-)
LOC110507462 LOC106580732 other upstream 1336919 8839834 ~ 8852498 (-)
LOC110507062 sptbn4 other upstream 1546173 9057091 ~ 9122143 (-)
LOC110507482 LOC100380674 other upstream 1908385 9407624 ~ 9430544 (-)
G2049778 LOC106580756 other upstream 2037602 9548527 ~ 9557832 (-)

Expression


Co-expression Network