G2047432


Basic Information

Item Value
gene id G2047432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7927098 ~ 7927394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2341972
CCTTCATCAAGgggcagatagcccggttagccaatgtgcgggagcactggttggtctgcccaattgaggtagtatgtacatgaatgtatagttaaagtgactatgcatatatgataaacagagagtagcagcagcgtaaaaagaggggttagAGGGGCACATAATGCAAAtattccgggtagccatttgattacctgttcaggagtcttatggcttgggggtaaaaactgttgagaagcctttttgtcctagacttggcactacgGTACCGCTTGcaatgcggtagtagagagaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2341972 True 297 lncRNA 0.46 1 7927098 7927394

Neighbor

gene id symbol gene type direction distance location
LOC110507446 LOC106612727 coding upstream 395655 7515824 ~ 7531443 (+)
LOC110507445 LOC106612744 coding upstream 424842 7497990 ~ 7502256 (+)
LOC110507440 LOC106612400 coding upstream 717570 7197450 ~ 7209528 (+)
LOC110507439 prkd2 coding upstream 743661 7135522 ~ 7183437 (+)
LOC110507437 strn4 coding upstream 793836 7107965 ~ 7133262 (+)
LOC110507452 LOC106580723 coding downstream 292450 8219844 ~ 8222436 (+)
LOC110507457 bl1s3 coding downstream 360054 8287448 ~ 8292186 (+)
si:cabz01090165.1 LOC106580728 coding downstream 679156 8606550 ~ 8741534 (+)
LOC110507459 LOC106580729 coding downstream 861202 8788596 ~ 8791813 (+)
LOC110507061 ltbp4 coding downstream 1031012 8958406 ~ 9033108 (+)
G2047049 NA non-coding upstream 275470 7651419 ~ 7651628 (+)
G2047042 NA non-coding upstream 280058 7646777 ~ 7647040 (+)
G2046595 NA non-coding upstream 297053 7629822 ~ 7630045 (+)
G2046593 NA non-coding upstream 298951 7627931 ~ 7628147 (+)
G2046592 NA non-coding upstream 299466 7627236 ~ 7627632 (+)
G2047436 NA non-coding downstream 4405 7931799 ~ 7932177 (+)
G2047437 NA non-coding downstream 5046 7932440 ~ 7932655 (+)
G2047466 NA non-coding downstream 23244 7950638 ~ 7950892 (+)
G2047601 NA non-coding downstream 118054 8045448 ~ 8045728 (+)
G2047737 NA non-coding downstream 229352 8156746 ~ 8157056 (+)
G2046384 LOC106612398 other upstream 668868 7256631 ~ 7258230 (+)
G2046345 NA other upstream 675523 7245806 ~ 7251575 (+)
G2045665 NA other upstream 1206406 6719764 ~ 6720692 (+)
G2045655 NA other upstream 1234054 6692544 ~ 6693044 (+)
G2045522 NA other upstream 1431964 6494833 ~ 6495134 (+)
G2049339 LOC100380674 other downstream 1480231 9407625 ~ 9408571 (+)
G2049657 NA other downstream 1860412 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 2351716 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 2461607 10384807 ~ 10390951 (+)

Expression


Co-expression Network