G2047601


Basic Information

Item Value
gene id G2047601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 8045448 ~ 8045728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2342142
atattgcgacggaggacaccaagcgaccacctggtaaatatagtctcttatggtcaatcttccaataatatgcctacaaatacgtcacaatgctgcagacaccttggggaaaaagtggaaaaggtaagctgactcctagctcctccacagccatataaggagttattgccatgaggcggtttcaaaaaatgcggcacttcctgattgtatttttatctgggtttttttctgtaacatcggttctgtggcactcacagacaatatctttgcagttttggaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2342142 True 281 lncRNA 0.42 1 8045448 8045728

Neighbor

gene id symbol gene type direction distance location
LOC110507446 LOC106612727 coding upstream 514005 7515824 ~ 7531443 (+)
LOC110507445 LOC106612744 coding upstream 543192 7497990 ~ 7502256 (+)
LOC110507440 LOC106612400 coding upstream 835920 7197450 ~ 7209528 (+)
LOC110507439 prkd2 coding upstream 862011 7135522 ~ 7183437 (+)
LOC110507437 strn4 coding upstream 912186 7107965 ~ 7133262 (+)
LOC110507452 LOC106580723 coding downstream 174116 8219844 ~ 8222436 (+)
LOC110507457 bl1s3 coding downstream 241720 8287448 ~ 8292186 (+)
si:cabz01090165.1 LOC106580728 coding downstream 560822 8606550 ~ 8741534 (+)
LOC110507459 LOC106580729 coding downstream 742868 8788596 ~ 8791813 (+)
LOC110507061 ltbp4 coding downstream 912678 8958406 ~ 9033108 (+)
G2047466 NA non-coding upstream 94556 7950638 ~ 7950892 (+)
G2047437 NA non-coding upstream 112793 7932440 ~ 7932655 (+)
G2047436 NA non-coding upstream 113271 7931799 ~ 7932177 (+)
G2047432 NA non-coding upstream 118054 7927098 ~ 7927394 (+)
G2047049 NA non-coding upstream 393820 7651419 ~ 7651628 (+)
G2047737 NA non-coding downstream 111018 8156746 ~ 8157056 (+)
G2047739 NA non-coding downstream 120016 8165744 ~ 8165948 (+)
G2047747 NA non-coding downstream 130088 8175816 ~ 8176043 (+)
G2047749 NA non-coding downstream 131273 8177001 ~ 8177266 (+)
G2047788 NA non-coding downstream 187102 8232830 ~ 8320784 (+)
G2046384 LOC106612398 other upstream 787218 7256631 ~ 7258230 (+)
G2046345 NA other upstream 793873 7245806 ~ 7251575 (+)
G2045665 NA other upstream 1324756 6719764 ~ 6720692 (+)
G2045655 NA other upstream 1352404 6692544 ~ 6693044 (+)
G2045522 NA other upstream 1550314 6494833 ~ 6495134 (+)
G2049339 LOC100380674 other downstream 1361897 9407625 ~ 9408571 (+)
G2049657 NA other downstream 1742078 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 2233382 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 2343273 10384807 ~ 10390951 (+)

Expression


Co-expression Network