Gene
RNA
| Item | Value |
|---|---|
| gene id | G2047739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 8165744 ~ 8165948 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| piggyBac transposable element-derived protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2342292 | True | 205 | lncRNA | 0.47 | 1 | 8165744 | 8165948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507446 | LOC106612727 | coding | upstream | 634301 | 7515824 ~ 7531443 (+) |
| LOC110507445 | LOC106612744 | coding | upstream | 663488 | 7497990 ~ 7502256 (+) |
| LOC110507440 | LOC106612400 | coding | upstream | 956216 | 7197450 ~ 7209528 (+) |
| LOC110507439 | prkd2 | coding | upstream | 982307 | 7135522 ~ 7183437 (+) |
| LOC110507437 | strn4 | coding | upstream | 1032482 | 7107965 ~ 7133262 (+) |
| LOC110507452 | LOC106580723 | coding | downstream | 53896 | 8219844 ~ 8222436 (+) |
| LOC110507457 | bl1s3 | coding | downstream | 121500 | 8287448 ~ 8292186 (+) |
| si:cabz01090165.1 | LOC106580728 | coding | downstream | 440602 | 8606550 ~ 8741534 (+) |
| LOC110507459 | LOC106580729 | coding | downstream | 622648 | 8788596 ~ 8791813 (+) |
| LOC110507061 | ltbp4 | coding | downstream | 792458 | 8958406 ~ 9033108 (+) |
| G2047737 | NA | non-coding | upstream | 8688 | 8156746 ~ 8157056 (+) |
| G2047601 | NA | non-coding | upstream | 120016 | 8045448 ~ 8045728 (+) |
| G2047466 | NA | non-coding | upstream | 214852 | 7950638 ~ 7950892 (+) |
| G2047437 | NA | non-coding | upstream | 233089 | 7932440 ~ 7932655 (+) |
| G2047436 | NA | non-coding | upstream | 233567 | 7931799 ~ 7932177 (+) |
| G2047747 | NA | non-coding | downstream | 9868 | 8175816 ~ 8176043 (+) |
| G2047749 | NA | non-coding | downstream | 11053 | 8177001 ~ 8177266 (+) |
| G2047788 | NA | non-coding | downstream | 66882 | 8232830 ~ 8320784 (+) |
| G2048081 | NA | non-coding | downstream | 235816 | 8401764 ~ 8402011 (+) |
| G2048086 | NA | non-coding | downstream | 240947 | 8406895 ~ 8407118 (+) |
| G2046384 | LOC106612398 | other | upstream | 907514 | 7256631 ~ 7258230 (+) |
| G2046345 | NA | other | upstream | 914169 | 7245806 ~ 7251575 (+) |
| G2045665 | NA | other | upstream | 1445052 | 6719764 ~ 6720692 (+) |
| G2045655 | NA | other | upstream | 1472700 | 6692544 ~ 6693044 (+) |
| G2045522 | NA | other | upstream | 1670610 | 6494833 ~ 6495134 (+) |
| G2049339 | LOC100380674 | other | downstream | 1241677 | 9407625 ~ 9408571 (+) |
| G2049657 | NA | other | downstream | 1621858 | 9787806 ~ 9788115 (+) |
| LOC110507067 | LOC106580782 | other | downstream | 2113162 | 10251889 ~ 10282483 (+) |
| LOC110507523 | LOC106580787 | other | downstream | 2223053 | 10384807 ~ 10390951 (+) |
