G2047788


Basic Information

Item Value
gene id G2047788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 8232830 ~ 8320784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2342341
ggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaacttcttcacaacagtatctcggacctgccttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagagacagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2342341 True 349 lncRNA 0.42 3 8232830 8320784

Neighbor

gene id symbol gene type direction distance location
LOC110507452 LOC106580723 coding upstream 10394 8219844 ~ 8222436 (+)
LOC110507446 LOC106612727 coding upstream 701387 7515824 ~ 7531443 (+)
LOC110507445 LOC106612744 coding upstream 730574 7497990 ~ 7502256 (+)
LOC110507440 LOC106612400 coding upstream 1023302 7197450 ~ 7209528 (+)
LOC110507439 prkd2 coding upstream 1049393 7135522 ~ 7183437 (+)
si:cabz01090165.1 LOC106580728 coding downstream 285766 8606550 ~ 8741534 (+)
LOC110507459 LOC106580729 coding downstream 467812 8788596 ~ 8791813 (+)
LOC110507061 ltbp4 coding downstream 637622 8958406 ~ 9033108 (+)
esrrd LOC106580735 coding downstream 716184 9036968 ~ 9043679 (+)
LOC110507468 blvrb coding downstream 802812 9123596 ~ 9126312 (+)
G2047749 NA non-coding upstream 55564 8177001 ~ 8177266 (+)
G2047747 NA non-coding upstream 56787 8175816 ~ 8176043 (+)
G2047739 NA non-coding upstream 66882 8165744 ~ 8165948 (+)
G2047737 NA non-coding upstream 75774 8156746 ~ 8157056 (+)
G2047601 NA non-coding upstream 187102 8045448 ~ 8045728 (+)
G2048081 NA non-coding downstream 80980 8401764 ~ 8402011 (+)
G2048086 NA non-coding downstream 86111 8406895 ~ 8407118 (+)
G2048160 NA non-coding downstream 143989 8464773 ~ 8465031 (+)
G2048181 NA non-coding downstream 161288 8482072 ~ 8482296 (+)
G2048186 NA non-coding downstream 164767 8485551 ~ 8485782 (+)
G2046384 LOC106612398 other upstream 974600 7256631 ~ 7258230 (+)
G2046345 NA other upstream 981255 7245806 ~ 7251575 (+)
G2045665 NA other upstream 1512138 6719764 ~ 6720692 (+)
G2045655 NA other upstream 1539786 6692544 ~ 6693044 (+)
G2045522 NA other upstream 1737696 6494833 ~ 6495134 (+)
G2049339 LOC100380674 other downstream 1086841 9407625 ~ 9408571 (+)
G2049657 NA other downstream 1467022 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 1958326 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 2068217 10384807 ~ 10390951 (+)

Expression


Co-expression Network