G2048086


Basic Information

Item Value
gene id G2048086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 8406895 ~ 8407118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2342652
atttattgactggCTATGGCTTTCCAGATcgcccaacactgctatttgcAAGGTTAATTTGAACAGCATGTtgtgattttttatttaaccatttctgaacctgtgaccagaaacaagctacataggggCAATACTAGAATAAGtgatctattgattctgtctcttcacaacaacatctacagagctgagagtgttgtatgccccatatatatagcattctgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2342652 True 224 lncRNA 0.38 1 8406895 8407118

Neighbor

gene id symbol gene type direction distance location
LOC110507457 bl1s3 coding upstream 114709 8287448 ~ 8292186 (+)
LOC110507452 LOC106580723 coding upstream 184459 8219844 ~ 8222436 (+)
LOC110507446 LOC106612727 coding upstream 875452 7515824 ~ 7531443 (+)
LOC110507445 LOC106612744 coding upstream 904639 7497990 ~ 7502256 (+)
LOC110507440 LOC106612400 coding upstream 1197367 7197450 ~ 7209528 (+)
si:cabz01090165.1 LOC106580728 coding downstream 199432 8606550 ~ 8741534 (+)
LOC110507459 LOC106580729 coding downstream 381478 8788596 ~ 8791813 (+)
LOC110507061 ltbp4 coding downstream 551288 8958406 ~ 9033108 (+)
esrrd LOC106580735 coding downstream 629850 9036968 ~ 9043679 (+)
LOC110507468 blvrb coding downstream 716478 9123596 ~ 9126312 (+)
G2048081 NA non-coding upstream 4884 8401764 ~ 8402011 (+)
G2047788 NA non-coding upstream 86111 8232830 ~ 8320784 (+)
G2047749 NA non-coding upstream 229629 8177001 ~ 8177266 (+)
G2047747 NA non-coding upstream 230852 8175816 ~ 8176043 (+)
G2047739 NA non-coding upstream 240947 8165744 ~ 8165948 (+)
G2048160 NA non-coding downstream 57655 8464773 ~ 8465031 (+)
G2048181 NA non-coding downstream 74954 8482072 ~ 8482296 (+)
G2048186 NA non-coding downstream 78433 8485551 ~ 8485782 (+)
G2048227 NA non-coding downstream 116007 8523125 ~ 8540832 (+)
G2048459 NA non-coding downstream 320611 8727729 ~ 8727958 (+)
G2046384 LOC106612398 other upstream 1148665 7256631 ~ 7258230 (+)
G2046345 NA other upstream 1155320 7245806 ~ 7251575 (+)
G2045665 NA other upstream 1686203 6719764 ~ 6720692 (+)
G2045655 NA other upstream 1713851 6692544 ~ 6693044 (+)
G2045522 NA other upstream 1911761 6494833 ~ 6495134 (+)
G2049339 LOC100380674 other downstream 1000507 9407625 ~ 9408571 (+)
G2049657 NA other downstream 1380688 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 1871992 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 1981883 10384807 ~ 10390951 (+)

Expression


Co-expression Network