Gene
RNA
| Item | Value |
|---|---|
| gene id | G2048942 |
| gene name | sptbn4 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 9097438 ~ 9098286 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| sptbn4 | Enables ankyrin binding activity and phosphatase binding activity. Predicted to be involved in several processes, including adult walking behavior; neuron development; and regulation of heart contraction. Predicted to act upstream of or within several processes, including adult behavior; fertilization; and regulation of growth. Located in cytoplasm; membrane; and nuclear lumen. Part of spectrin. |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2343571 | True | 849 | lncRNA | 0.62 | 1 | 9097438 | 9098286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| esrrd | LOC106580735 | coding | upstream | 53759 | 9036968 ~ 9043679 (+) |
| LOC110507061 | ltbp4 | coding | upstream | 64330 | 8958406 ~ 9033108 (+) |
| LOC110507459 | LOC106580729 | coding | upstream | 305625 | 8788596 ~ 8791813 (+) |
| si:cabz01090165.1 | LOC106580728 | coding | upstream | 355909 | 8606550 ~ 8741534 (+) |
| LOC110507457 | bl1s3 | coding | upstream | 805252 | 8287448 ~ 8292186 (+) |
| LOC110507468 | blvrb | coding | downstream | 25310 | 9123596 ~ 9126312 (+) |
| LOC110507469 | sertad3 | coding | downstream | 29745 | 9128031 ~ 9130735 (+) |
| LOC110507063 | hipk4 | coding | downstream | 111468 | 9209754 ~ 9212063 (+) |
| LOC110507479 | LOC106580747 | coding | downstream | 173555 | 9271841 ~ 9273709 (+) |
| LOC110507484 | LOC106580753 | coding | downstream | 408199 | 9506485 ~ 9538992 (+) |
| G2048926 | sptbn4 | non-coding | upstream | 27316 | 9069826 ~ 9070122 (+) |
| G2048925 | sptbn4 | non-coding | upstream | 28138 | 9069042 ~ 9069300 (+) |
| G2048924 | NA | non-coding | upstream | 28694 | 9068497 ~ 9068744 (+) |
| G2048873 | sptbn4 | non-coding | upstream | 29477 | 8973119 ~ 9067961 (+) |
| G2048859 | NA | non-coding | upstream | 143342 | 8953773 ~ 8954096 (+) |
| G2048957 | NA | non-coding | downstream | 23482 | 9121768 ~ 9122180 (+) |
| G2049072 | NA | non-coding | downstream | 37269 | 9135555 ~ 9139211 (+) |
| G2049089 | NA | non-coding | downstream | 57135 | 9155421 ~ 9156365 (+) |
| G2049091 | NA | non-coding | downstream | 63362 | 9161648 ~ 9161987 (+) |
| G2049095 | NA | non-coding | downstream | 72163 | 9170449 ~ 9170649 (+) |
| G2046384 | LOC106612398 | other | upstream | 1839208 | 7256631 ~ 7258230 (+) |
| G2046345 | NA | other | upstream | 1845863 | 7245806 ~ 7251575 (+) |
| G2045665 | NA | other | upstream | 2376746 | 6719764 ~ 6720692 (+) |
| G2045655 | NA | other | upstream | 2404394 | 6692544 ~ 6693044 (+) |
| G2049339 | LOC100380674 | other | downstream | 309339 | 9407625 ~ 9408571 (+) |
| G2049657 | NA | other | downstream | 689520 | 9787806 ~ 9788115 (+) |
| LOC110507067 | LOC106580782 | other | downstream | 1180824 | 10251889 ~ 10282483 (+) |
| LOC110507523 | LOC106580787 | other | downstream | 1290715 | 10384807 ~ 10390951 (+) |
| LOC110507524 | LOC106612657 | other | downstream | 1308087 | 10391240 ~ 10417311 (+) |
