G2048957


Basic Information

Item Value
gene id G2048957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9121768 ~ 9122180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2343588
CTCAATTTCAGATATGAGTTTGTTTTTCACCGAAATATAcgtaaaaatctgtcgatgtggtGCCAGTATCAATGAACCAGTGAGCAAATTATGAACAGAGCCTCGCGACGCGGTGTTTCTTCGCTGGCATAGTAGTCAAGTAGCCTATATCCTCAATCGAACTGTGGGATCAGGATGAATATATCTGGCTAATAAAGGCAGATAATGCGGCAATACATGTCAATTCCCTGCCGTGGCTAGTGGGACCACGCGACTGCCATGAAAGGTGTATTGCAGCCAGGCTAAAATGCTTGATCAAATAATCCAAGCCGGTGGGCTCGGATATACTGTCCACTTGATAGCCTAcgcgctccctctccctccagtcGTGATACTGCTAGAGAGAATTCGGCATTAGTGCGGCGAAGGAACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2343588 True 413 lncRNA 0.47 1 9121768 9122180

Neighbor

gene id symbol gene type direction distance location
esrrd LOC106580735 coding upstream 78089 9036968 ~ 9043679 (+)
LOC110507061 ltbp4 coding upstream 88660 8958406 ~ 9033108 (+)
LOC110507459 LOC106580729 coding upstream 329955 8788596 ~ 8791813 (+)
si:cabz01090165.1 LOC106580728 coding upstream 380239 8606550 ~ 8741534 (+)
LOC110507457 bl1s3 coding upstream 829582 8287448 ~ 8292186 (+)
LOC110507468 blvrb coding downstream 1416 9123596 ~ 9126312 (+)
LOC110507469 sertad3 coding downstream 5851 9128031 ~ 9130735 (+)
LOC110507063 hipk4 coding downstream 87574 9209754 ~ 9212063 (+)
LOC110507479 LOC106580747 coding downstream 149661 9271841 ~ 9273709 (+)
LOC110507484 LOC106580753 coding downstream 384305 9506485 ~ 9538992 (+)
G2048942 sptbn4 non-coding upstream 23482 9097438 ~ 9098286 (+)
G2048926 sptbn4 non-coding upstream 51646 9069826 ~ 9070122 (+)
G2048925 sptbn4 non-coding upstream 52468 9069042 ~ 9069300 (+)
G2048924 NA non-coding upstream 53024 9068497 ~ 9068744 (+)
G2048873 sptbn4 non-coding upstream 53807 8973119 ~ 9067961 (+)
G2049072 NA non-coding downstream 13375 9135555 ~ 9139211 (+)
G2049089 NA non-coding downstream 33241 9155421 ~ 9156365 (+)
G2049091 NA non-coding downstream 39468 9161648 ~ 9161987 (+)
G2049095 NA non-coding downstream 48269 9170449 ~ 9170649 (+)
G2049073 pld3 non-coding downstream 90170 9212350 ~ 9224788 (+)
G2046384 LOC106612398 other upstream 1863538 7256631 ~ 7258230 (+)
G2046345 NA other upstream 1870193 7245806 ~ 7251575 (+)
G2045665 NA other upstream 2401076 6719764 ~ 6720692 (+)
G2045655 NA other upstream 2428724 6692544 ~ 6693044 (+)
G2049339 LOC100380674 other downstream 285445 9407625 ~ 9408571 (+)
G2049657 NA other downstream 665626 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 1156930 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 1266821 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 1284193 10391240 ~ 10417311 (+)

Expression


Co-expression Network