G2049091


Basic Information

Item Value
gene id G2049091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9161648 ~ 9161987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2343739
ATACCCAGATTCTCAGAGCGAGACGTTGCCAGACGTGTAATTGCCGTTGCGTGTTGTTTGCGAAACCTTAACCTTCATTTGATAGGTCTTGTAGAATAATTTCGTGCGTCTCCCACGAACACGACTCCCTGAACATCGGCCGACGAGGGTTTCTATAATCTACAATAATTTGTTTAGAGGTGGAAAAGGTCCACTCTGCCTGCATCGAAGTCAAAAAGGCTGTTTTAAAAATGAAATCAACATTTTCTGTGAGTCTCTTTGATCAGCTTATTCAAGCCAGCCAACAGCTGCGTCCTTACCGCAGTAGCCTACAGTACGTGCGTCCAGCAACCAGAATGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2343739 True 340 lncRNA 0.45 1 9161648 9161987

Neighbor

gene id symbol gene type direction distance location
LOC110507469 sertad3 coding upstream 30913 9128031 ~ 9130735 (+)
LOC110507468 blvrb coding upstream 35336 9123596 ~ 9126312 (+)
esrrd LOC106580735 coding upstream 117969 9036968 ~ 9043679 (+)
LOC110507061 ltbp4 coding upstream 128540 8958406 ~ 9033108 (+)
LOC110507459 LOC106580729 coding upstream 369835 8788596 ~ 8791813 (+)
LOC110507063 hipk4 coding downstream 47767 9209754 ~ 9212063 (+)
LOC110507479 LOC106580747 coding downstream 109854 9271841 ~ 9273709 (+)
LOC110507484 LOC106580753 coding downstream 344498 9506485 ~ 9538992 (+)
LOC110507488 LOC106580752 coding downstream 435169 9597156 ~ 9619474 (+)
LOC110507489 LOC106580757 coding downstream 462927 9624914 ~ 9640110 (+)
G2049089 NA non-coding upstream 5283 9155421 ~ 9156365 (+)
G2049072 NA non-coding upstream 22437 9135555 ~ 9139211 (+)
G2048957 NA non-coding upstream 39468 9121768 ~ 9122180 (+)
G2048942 sptbn4 non-coding upstream 63362 9097438 ~ 9098286 (+)
G2048926 sptbn4 non-coding upstream 91526 9069826 ~ 9070122 (+)
G2049095 NA non-coding downstream 8462 9170449 ~ 9170649 (+)
G2049073 pld3 non-coding downstream 50363 9212350 ~ 9224788 (+)
G2049107 NA non-coding downstream 91504 9253491 ~ 9254055 (+)
G2049132 NA non-coding downstream 96046 9258033 ~ 9258407 (+)
G2049133 NA non-coding downstream 112355 9274342 ~ 9274622 (+)
si:cabz01090165.1 LOC106580728 other upstream 437345 8606550 ~ 8741534 (+)
G2046384 LOC106612398 other upstream 1903418 7256631 ~ 7258230 (+)
G2046345 NA other upstream 1910073 7245806 ~ 7251575 (+)
G2045665 NA other upstream 2440956 6719764 ~ 6720692 (+)
G2045655 NA other upstream 2468604 6692544 ~ 6693044 (+)
G2049339 LOC100380674 other downstream 245638 9407625 ~ 9408571 (+)
G2049657 NA other downstream 625819 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 1117123 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 1227014 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 1244386 10391240 ~ 10417311 (+)

Expression


Co-expression Network