G2049371


Basic Information

Item Value
gene id G2049371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9457814 ~ 9458137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2344042
gagatttgagtcagtatgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttttggcttcctgtgacatcgggtgatgtagcAGTCCtgcagggcaggtagtttgccccctattgatgcgttgtgcagaccgcactaccctctggagagccttatggttatgggcggagcagttgccgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2344042 True 324 lncRNA 0.52 1 9457814 9458137

Neighbor

gene id symbol gene type direction distance location
LOC110507479 LOC106580747 coding upstream 184105 9271841 ~ 9273709 (+)
LOC110507063 hipk4 coding upstream 245751 9209754 ~ 9212063 (+)
LOC110507469 sertad3 coding upstream 327079 9128031 ~ 9130735 (+)
LOC110507468 blvrb coding upstream 331502 9123596 ~ 9126312 (+)
esrrd LOC106580735 coding upstream 414135 9036968 ~ 9043679 (+)
LOC110507484 LOC106580753 coding downstream 48348 9506485 ~ 9538992 (+)
LOC110507488 LOC106580752 coding downstream 139019 9597156 ~ 9619474 (+)
LOC110507489 LOC106580757 coding downstream 166777 9624914 ~ 9640110 (+)
LOC110507491 LOC106580758 coding downstream 188550 9646687 ~ 9658211 (+)
capn4 LOC106580760 coding downstream 212627 9670764 ~ 9677392 (+)
G2049345 NA non-coding upstream 37584 9419299 ~ 9420230 (+)
G2049171 NA non-coding upstream 104476 9352884 ~ 9353338 (+)
G2049166 NA non-coding upstream 113411 9344163 ~ 9344403 (+)
G2049162 NA non-coding upstream 118283 9339250 ~ 9339531 (+)
G2049134 NA non-coding upstream 182648 9274688 ~ 9275166 (+)
G2049372 NA non-coding downstream 183 9458320 ~ 9458633 (+)
G2049389 NA non-coding downstream 23366 9481503 ~ 9481721 (+)
G2049396 NA non-coding downstream 30229 9488366 ~ 9488731 (+)
G2049512 NA non-coding downstream 45612 9503749 ~ 9504034 (+)
G2049523 NA non-coding downstream 52539 9510676 ~ 9516458 (+)
G2049339 LOC100380674 other upstream 49243 9407625 ~ 9408571 (+)
si:cabz01090165.1 LOC106580728 other upstream 733511 8606550 ~ 8741534 (+)
G2046384 LOC106612398 other upstream 2199584 7256631 ~ 7258230 (+)
G2046345 NA other upstream 2206239 7245806 ~ 7251575 (+)
G2045665 NA other upstream 2737122 6719764 ~ 6720692 (+)
G2049657 NA other downstream 329669 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 820973 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 930864 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 948236 10391240 ~ 10417311 (+)
rap1gap2a LOC106580794 other downstream 1117573 10494894 ~ 10583085 (+)

Expression


Co-expression Network