G2049558


Basic Information

Item Value
gene id G2049558
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9559076 ~ 9561926 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2344244
ctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcggggatttgaacttgcaacctttttgttactagtccaacactctacccactaggctgccctgccgccccattaatcACCCACGGACAGGTTCATAATAATGGACCATTCCACCCTTACAGAGTTCCCACAATATTATTGCAAAAGTAACTTATTGAAATTAAGCTGCAGCAAAATGAGGCACTTTCTGAGCAGGGCAGAGAAAAGAAAGGTCATTTCTTGTTAAAATTAAATCTTACATTTATTTGGTAAAAAGGACAGGTGCTGCTGACAATGCCATTGTGGTGGAGTCTGAGGACATGTATGtatagcCCTCTATATTCACCGAAGGCTTTCACCAGCATCTTAGCCTCTTCTTGGACACGTTCTTCGATGCTCCTGCGCCCCATCCCAAAGGTTTTAAGGGTCATCAGCGAGAACCTGCGAAGATCTTTTGATCTCTTCCCACTGCtcaccaacacccctacagtaAACAGTATGACAGAAGCACAAAGAAGAAGAATTAGAATAGCAT

Function

NR:

description
cytochrome P450 2M1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2344244 True 575 lncRNA 0.44 2 9559076 9561926
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110507484 LOC106580753 coding upstream 20084 9506485 ~ 9538992 (+)
LOC110507479 LOC106580747 coding upstream 285367 9271841 ~ 9273709 (+)
LOC110507063 hipk4 coding upstream 347013 9209754 ~ 9212063 (+)
LOC110507469 sertad3 coding upstream 428341 9128031 ~ 9130735 (+)
LOC110507468 blvrb coding upstream 432764 9123596 ~ 9126312 (+)
LOC110507488 LOC106580752 coding downstream 35230 9597156 ~ 9619474 (+)
LOC110507489 LOC106580757 coding downstream 62988 9624914 ~ 9640110 (+)
LOC110507491 LOC106580758 coding downstream 84761 9646687 ~ 9658211 (+)
capn4 LOC106580760 coding downstream 108838 9670764 ~ 9677392 (+)
LOC110507494 LOC106580760 coding downstream 137867 9699793 ~ 9705322 (+)
G2049556 LOC106580756 non-coding upstream 1568 9548632 ~ 9557508 (+)
G2049533 NA non-coding upstream 25451 9533333 ~ 9533625 (+)
G2049529 NA non-coding upstream 34063 9524690 ~ 9525013 (+)
G2049524 NA non-coding upstream 41429 9512224 ~ 9517647 (+)
G2049554 NA non-coding downstream 3214 9565140 ~ 9593578 (+)
G2049555 NA non-coding downstream 100171 9662097 ~ 9664055 (+)
G2049560 NA non-coding downstream 154320 9716246 ~ 9716755 (+)
G2049559 NA non-coding downstream 158470 9720396 ~ 9721576 (+)
G2049640 NA non-coding downstream 204125 9766051 ~ 9766274 (+)
G2049339 LOC100380674 other upstream 150505 9407625 ~ 9408571 (+)
si:cabz01090165.1 LOC106580728 other upstream 834773 8606550 ~ 8741534 (+)
G2046384 LOC106612398 other upstream 2300846 7256631 ~ 7258230 (+)
G2046345 NA other upstream 2307501 7245806 ~ 7251575 (+)
G2045665 NA other upstream 2838384 6719764 ~ 6720692 (+)
G2049657 NA other downstream 225880 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 717184 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 827075 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 844447 10391240 ~ 10417311 (+)
rap1gap2a LOC106580794 other downstream 1013784 10494894 ~ 10583085 (+)

Expression

G2049558 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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G2049558 Expression in each Bioproject

Bar chart with 18 bars.
G2049558 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network