G2049999


Basic Information

Item Value
gene id G2049999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9970888 ~ 9971095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2344747
tgaatatatggatgagcgatggccgagcggcataggcaagaagcaatagatggtataagatacagtttatacatatgagatgagtaatgtaagatatgtaaacataattagagtggcgttatttaaagtgactaatgatccatttattaaagtgactaatgatttcaagtctgtatgtaggcagcagcctctctatgttagtgatggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2344747 True 208 lncRNA 0.36 1 9970888 9971095

Neighbor

gene id symbol gene type direction distance location
LOC110507503 rnt2 coding upstream 132289 9835478 ~ 9838599 (+)
chp2 chp2 coding upstream 140781 9827192 ~ 9830107 (+)
LOC110507500 LOC106580764 coding upstream 191628 9770369 ~ 9779260 (+)
LOC110507499 LOC106580763 coding upstream 208140 9731766 ~ 9762748 (+)
LOC110507497 LOC106580762 coding upstream 239440 9728925 ~ 9731448 (+)
LOC110507507 LOC106580771 coding downstream 38417 10009512 ~ 10018937 (+)
LOC110507509 LOC106612674 coding downstream 52565 10023660 ~ 10060619 (+)
LOC110507511 LOC106580774 coding downstream 91284 10057431 ~ 10079394 (+)
usp2a LOC106580775 coding downstream 108806 10079901 ~ 10121525 (+)
LOC110507512 LOC106580776 coding downstream 150846 10121941 ~ 10125425 (+)
G2049758 NA non-coding upstream 7631 9963019 ~ 9963257 (+)
G2049707 NA non-coding upstream 83330 9882566 ~ 9887558 (+)
G2049650 LOC106580766 non-coding upstream 125837 9844592 ~ 9845051 (+)
G2049550 NA non-coding upstream 138964 9830381 ~ 9831924 (+)
G2049676 NA non-coding upstream 154882 9815783 ~ 9816006 (+)
G2050002 NA non-coding downstream 1502 9972597 ~ 9972853 (+)
G2050046 NA non-coding downstream 36602 10007697 ~ 10007896 (+)
G2050017 NA non-coding downstream 48515 10019610 ~ 10022745 (+)
G2050109 NA non-coding downstream 220892 10191987 ~ 10192242 (+)
G2049657 NA other upstream 182773 9787806 ~ 9788115 (+)
G2049339 LOC100380674 other upstream 562317 9407625 ~ 9408571 (+)
si:cabz01090165.1 LOC106580728 other upstream 1246585 8606550 ~ 8741534 (+)
G2046384 LOC106612398 other upstream 2712658 7256631 ~ 7258230 (+)
G2046345 NA other upstream 2719313 7245806 ~ 7251575 (+)
LOC110507067 LOC106580782 other downstream 308015 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 417906 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 435278 10391240 ~ 10417311 (+)
rap1gap2a LOC106580794 other downstream 604615 10494894 ~ 10583085 (+)
LOC110507540 git1 other downstream 803992 10755190 ~ 10778403 (+)

Expression


Co-expression Network