Gene
RNA
| Item | Value |
|---|---|
| gene id | G2050002 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 9972597 ~ 9972853 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2344750 | True | 257 | lncRNA | 0.39 | 1 | 9972597 | 9972853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507503 | rnt2 | coding | upstream | 133998 | 9835478 ~ 9838599 (+) |
| chp2 | chp2 | coding | upstream | 142490 | 9827192 ~ 9830107 (+) |
| LOC110507500 | LOC106580764 | coding | upstream | 193337 | 9770369 ~ 9779260 (+) |
| LOC110507499 | LOC106580763 | coding | upstream | 209849 | 9731766 ~ 9762748 (+) |
| LOC110507497 | LOC106580762 | coding | upstream | 241149 | 9728925 ~ 9731448 (+) |
| LOC110507507 | LOC106580771 | coding | downstream | 36659 | 10009512 ~ 10018937 (+) |
| LOC110507509 | LOC106612674 | coding | downstream | 50807 | 10023660 ~ 10060619 (+) |
| LOC110507511 | LOC106580774 | coding | downstream | 89526 | 10057431 ~ 10079394 (+) |
| usp2a | LOC106580775 | coding | downstream | 107048 | 10079901 ~ 10121525 (+) |
| LOC110507512 | LOC106580776 | coding | downstream | 149088 | 10121941 ~ 10125425 (+) |
| G2049999 | NA | non-coding | upstream | 1502 | 9970888 ~ 9971095 (+) |
| G2049758 | NA | non-coding | upstream | 9340 | 9963019 ~ 9963257 (+) |
| G2049707 | NA | non-coding | upstream | 85039 | 9882566 ~ 9887558 (+) |
| G2049650 | LOC106580766 | non-coding | upstream | 127546 | 9844592 ~ 9845051 (+) |
| G2049550 | NA | non-coding | upstream | 140673 | 9830381 ~ 9831924 (+) |
| G2050046 | NA | non-coding | downstream | 34844 | 10007697 ~ 10007896 (+) |
| G2050017 | NA | non-coding | downstream | 46757 | 10019610 ~ 10022745 (+) |
| G2050109 | NA | non-coding | downstream | 219134 | 10191987 ~ 10192242 (+) |
| G2050122 | NA | non-coding | downstream | 241791 | 10214644 ~ 10214948 (+) |
| G2049657 | NA | other | upstream | 184482 | 9787806 ~ 9788115 (+) |
| G2049339 | LOC100380674 | other | upstream | 564026 | 9407625 ~ 9408571 (+) |
| si:cabz01090165.1 | LOC106580728 | other | upstream | 1248294 | 8606550 ~ 8741534 (+) |
| G2046384 | LOC106612398 | other | upstream | 2714367 | 7256631 ~ 7258230 (+) |
| G2046345 | NA | other | upstream | 2721022 | 7245806 ~ 7251575 (+) |
| LOC110507067 | LOC106580782 | other | downstream | 306257 | 10251889 ~ 10282483 (+) |
| LOC110507523 | LOC106580787 | other | downstream | 416148 | 10384807 ~ 10390951 (+) |
| LOC110507524 | LOC106612657 | other | downstream | 433520 | 10391240 ~ 10417311 (+) |
| rap1gap2a | LOC106580794 | other | downstream | 602857 | 10494894 ~ 10583085 (+) |
| LOC110507540 | git1 | other | downstream | 802234 | 10755190 ~ 10778403 (+) |
