Gene
RNA
| Item | Value |
|---|---|
| gene id | G2050109 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 10191987 ~ 10192242 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2344870 | True | 256 | lncRNA | 0.40 | 1 | 10191987 | 10192242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507516 | LOC106580779 | coding | upstream | 27272 | 10156632 ~ 10164715 (+) |
| LOC110507514 | LOC106580778 | coding | upstream | 41336 | 10146557 ~ 10150651 (+) |
| LOC110507512 | LOC106580776 | coding | upstream | 66562 | 10121941 ~ 10125425 (+) |
| usp2a | LOC106580775 | coding | upstream | 70462 | 10079901 ~ 10121525 (+) |
| LOC110507511 | LOC106580774 | coding | upstream | 112593 | 10057431 ~ 10079394 (+) |
| LOC110507517 | LOC106580780 | coding | downstream | 1438 | 10193680 ~ 10213605 (+) |
| sebox | LOC106580896 | coding | downstream | 25278 | 10217520 ~ 10218686 (+) |
| LOC110507518 | LOC106562846 | coding | downstream | 38463 | 10230705 ~ 10233860 (+) |
| LOC110507519 | LOC106580781 | coding | downstream | 44127 | 10236369 ~ 10250613 (+) |
| LOC110507067 | LOC106580782 | coding | downstream | 59647 | 10251889 ~ 10282483 (+) |
| G2050017 | NA | non-coding | upstream | 169242 | 10019610 ~ 10022745 (+) |
| G2050046 | NA | non-coding | upstream | 184091 | 10007697 ~ 10007896 (+) |
| G2050002 | NA | non-coding | upstream | 219134 | 9972597 ~ 9972853 (+) |
| G2049999 | NA | non-coding | upstream | 220892 | 9970888 ~ 9971095 (+) |
| G2050122 | NA | non-coding | downstream | 22402 | 10214644 ~ 10214948 (+) |
| G2050123 | NA | non-coding | downstream | 27011 | 10219253 ~ 10219615 (+) |
| G2050164 | NA | non-coding | downstream | 119846 | 10312088 ~ 10371018 (+) |
| G2050178 | NA | non-coding | downstream | 183867 | 10376109 ~ 10377333 (+) |
| G2050200 | xaf1 | non-coding | downstream | 268628 | 10460870 ~ 10462018 (+) |
| G2049657 | NA | other | upstream | 403872 | 9787806 ~ 9788115 (+) |
| G2049339 | LOC100380674 | other | upstream | 783416 | 9407625 ~ 9408571 (+) |
| si:cabz01090165.1 | LOC106580728 | other | upstream | 1467684 | 8606550 ~ 8741534 (+) |
| G2046384 | LOC106612398 | other | upstream | 2933757 | 7256631 ~ 7258230 (+) |
| G2046345 | NA | other | upstream | 2940412 | 7245806 ~ 7251575 (+) |
| LOC110507523 | LOC106580787 | other | downstream | 196759 | 10384807 ~ 10390951 (+) |
| LOC110507524 | LOC106612657 | other | downstream | 214131 | 10391240 ~ 10417311 (+) |
| rap1gap2a | LOC106580794 | other | downstream | 383468 | 10494894 ~ 10583085 (+) |
| LOC110507540 | git1 | other | downstream | 582845 | 10755190 ~ 10778403 (+) |
