G2050122


Basic Information

Item Value
gene id G2050122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 10214644 ~ 10214948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2344883
ccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaatgttgtgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2344883 True 305 lncRNA 0.43 1 10214644 10214948

Neighbor

gene id symbol gene type direction distance location
LOC110507517 LOC106580780 coding upstream 1039 10193680 ~ 10213605 (+)
LOC110507516 LOC106580779 coding upstream 49929 10156632 ~ 10164715 (+)
LOC110507514 LOC106580778 coding upstream 63993 10146557 ~ 10150651 (+)
LOC110507512 LOC106580776 coding upstream 89219 10121941 ~ 10125425 (+)
usp2a LOC106580775 coding upstream 93119 10079901 ~ 10121525 (+)
sebox LOC106580896 coding downstream 2572 10217520 ~ 10218686 (+)
LOC110507518 LOC106562846 coding downstream 15757 10230705 ~ 10233860 (+)
LOC110507519 LOC106580781 coding downstream 21421 10236369 ~ 10250613 (+)
LOC110507067 LOC106580782 coding downstream 36941 10251889 ~ 10282483 (+)
LOC110507520 LOC106580783 coding downstream 72245 10287193 ~ 10293719 (+)
G2050109 NA non-coding upstream 22402 10191987 ~ 10192242 (+)
LOC110507511 LOC106580774 non-coding upstream 135834 10057431 ~ 10079394 (+)
G2050017 NA non-coding upstream 191899 10019610 ~ 10022745 (+)
G2050046 NA non-coding upstream 206748 10007697 ~ 10007896 (+)
G2050002 NA non-coding upstream 241791 9972597 ~ 9972853 (+)
G2050123 NA non-coding downstream 4305 10219253 ~ 10219615 (+)
G2050164 NA non-coding downstream 97140 10312088 ~ 10371018 (+)
G2050178 NA non-coding downstream 161161 10376109 ~ 10377333 (+)
G2050200 xaf1 non-coding downstream 245922 10460870 ~ 10462018 (+)
G2050234 NA non-coding downstream 300406 10515354 ~ 10515598 (+)
G2049657 NA other upstream 426529 9787806 ~ 9788115 (+)
G2049339 LOC100380674 other upstream 806073 9407625 ~ 9408571 (+)
si:cabz01090165.1 LOC106580728 other upstream 1490341 8606550 ~ 8741534 (+)
G2046384 LOC106612398 other upstream 2956414 7256631 ~ 7258230 (+)
G2046345 NA other upstream 2963069 7245806 ~ 7251575 (+)
LOC110507523 LOC106580787 other downstream 174053 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 191425 10391240 ~ 10417311 (+)
rap1gap2a LOC106580794 other downstream 360762 10494894 ~ 10583085 (+)
LOC110507540 git1 other downstream 560139 10755190 ~ 10778403 (+)

Expression


Co-expression Network