Gene
RNA
| Item | Value |
|---|---|
| gene id | G2050329 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 10788392 ~ 10789424 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2345161 | True | 424 | lncRNA | 0.47 | 2 | 10788392 | 10789424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507540 | git1 | coding | upstream | 9989 | 10755190 ~ 10778403 (+) |
| LOC110507539 | ssh2 | coding | upstream | 73439 | 10677850 ~ 10714953 (+) |
| LOC110507068 | LOC106612651 | coding | upstream | 145472 | 10609864 ~ 10642920 (+) |
| LOC110507537 | blmh | coding | upstream | 182435 | 10587351 ~ 10605957 (+) |
| LOC118944660 | NA | coding | upstream | 256228 | 10530057 ~ 10532164 (+) |
| LOC110507543 | NA | coding | downstream | 20524 | 10809948 ~ 10812006 (+) |
| LOC110507544 | LOC106580804 | coding | downstream | 25496 | 10814920 ~ 10913222 (+) |
| LOC118944743 | NA | coding | downstream | 177509 | 10966933 ~ 10971183 (+) |
| LOC110507545 | LOC106612642 | coding | downstream | 182556 | 10971980 ~ 12125733 (+) |
| cd3e | LOC100499597 | coding | downstream | 1399909 | 12189333 ~ 12193259 (+) |
| G2050364 | NA | non-coding | upstream | 5317 | 10781908 ~ 10783075 (+) |
| G2050281 | NA | non-coding | upstream | 48705 | 10650933 ~ 10739687 (+) |
| G2050334 | NA | non-coding | upstream | 67925 | 10718214 ~ 10720467 (+) |
| G2050212 | NA | non-coding | upstream | 239088 | 10549047 ~ 10549304 (+) |
| G2050374 | NA | non-coding | downstream | 19488 | 10808912 ~ 10809213 (+) |
| G2050376 | NA | non-coding | downstream | 22846 | 10812270 ~ 10814191 (+) |
| G2050394 | NA | non-coding | downstream | 44729 | 10834153 ~ 10839672 (+) |
| G2050988 | NA | non-coding | downstream | 161079 | 10950503 ~ 10950706 (+) |
| rap1gap2a | LOC106580794 | other | upstream | 205307 | 10494894 ~ 10583085 (+) |
| LOC110507524 | LOC106612657 | other | upstream | 371097 | 10391240 ~ 10417311 (+) |
| LOC110507523 | LOC106580787 | other | upstream | 397491 | 10384807 ~ 10390951 (+) |
| LOC110507067 | LOC106580782 | other | upstream | 505909 | 10251889 ~ 10282483 (+) |
| G2051034 | NA | other | downstream | 203561 | 10992985 ~ 10993588 (+) |
| G2051018 | LOC106580809 | other | downstream | 1338017 | 12127441 ~ 12137799 (+) |
| nudt8 | LOC106580825 | other | downstream | 1648535 | 12436060 ~ 12439501 (+) |
| G2053443 | NA | other | downstream | 2189103 | 12978527 ~ 12978923 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 2765316 | 13554250 ~ 13575495 (+) |
