Gene
RNA
| Item | Value |
|---|---|
| gene id | G2050993 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 10952999 ~ 10953232 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2345952 | True | 234 | lncRNA | 0.42 | 1 | 10952999 | 10953232 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507544 | LOC106580804 | coding | upstream | 39777 | 10814920 ~ 10913222 (+) |
| LOC110507543 | NA | coding | upstream | 140993 | 10809948 ~ 10812006 (+) |
| LOC110507542 | LOC106580802 | coding | upstream | 147463 | 10787642 ~ 10805536 (+) |
| LOC110507540 | git1 | coding | upstream | 174596 | 10755190 ~ 10778403 (+) |
| LOC110507539 | ssh2 | coding | upstream | 238046 | 10677850 ~ 10714953 (+) |
| LOC118944743 | NA | coding | downstream | 13701 | 10966933 ~ 10971183 (+) |
| LOC110507545 | LOC106612642 | coding | downstream | 18748 | 10971980 ~ 12125733 (+) |
| cd3e | LOC100499597 | coding | downstream | 1236101 | 12189333 ~ 12193259 (+) |
| LOC110507553 | LOC106580818 | coding | downstream | 1329086 | 12282318 ~ 12303781 (+) |
| apoa-i-1 | apoa-i-1 | coding | downstream | 1390573 | 12343805 ~ 12346332 (+) |
| G2050988 | NA | non-coding | upstream | 2293 | 10950503 ~ 10950706 (+) |
| G2050394 | NA | non-coding | upstream | 113327 | 10834153 ~ 10839672 (+) |
| G2050376 | NA | non-coding | upstream | 138808 | 10812270 ~ 10814191 (+) |
| G2050374 | NA | non-coding | upstream | 143786 | 10808912 ~ 10809213 (+) |
| G2050996 | NA | non-coding | downstream | 940 | 10954172 ~ 10954378 (+) |
| G2051041 | NA | non-coding | downstream | 48629 | 11001861 ~ 11002289 (+) |
| G2051422 | NA | non-coding | downstream | 587223 | 11540455 ~ 11777397 (+) |
| G2051500 | NA | non-coding | downstream | 678659 | 11631891 ~ 11697754 (+) |
| G2051892 | NA | non-coding | downstream | 1184948 | 12138180 ~ 12138453 (+) |
| rap1gap2a | LOC106580794 | other | upstream | 369914 | 10494894 ~ 10583085 (+) |
| LOC110507524 | LOC106612657 | other | upstream | 535704 | 10391240 ~ 10417311 (+) |
| LOC110507523 | LOC106580787 | other | upstream | 562098 | 10384807 ~ 10390951 (+) |
| LOC110507067 | LOC106580782 | other | upstream | 670516 | 10251889 ~ 10282483 (+) |
| G2051034 | NA | other | downstream | 39753 | 10992985 ~ 10993588 (+) |
| G2051018 | LOC106580809 | other | downstream | 1174209 | 12127441 ~ 12137799 (+) |
| nudt8 | LOC106580825 | other | downstream | 1484727 | 12436060 ~ 12439501 (+) |
| G2053443 | NA | other | downstream | 2025295 | 12978527 ~ 12978923 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 2601508 | 13554250 ~ 13575495 (+) |
