G2050996


Basic Information

Item Value
gene id G2050996
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 10954172 ~ 10954378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2345955
gtacagTATATTTCTGTTATGTTTATGgtgggtcaattaaggaagacttcctcttctgcaaaccactggaaaccaggacaacaggagaggatatttttaaagtactggacagctttgtgacatcaaatggactttggtggtcaagatgtgttggtatctgtactgatggcgcaaaatccatgacagggagacatagtggagtggtaa

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2345955 True 207 lncRNA 0.42 1 10954172 10954378

Neighbor

gene id symbol gene type direction distance location
LOC110507544 LOC106580804 coding upstream 40950 10814920 ~ 10913222 (+)
LOC110507543 NA coding upstream 142166 10809948 ~ 10812006 (+)
LOC110507542 LOC106580802 coding upstream 148636 10787642 ~ 10805536 (+)
LOC110507540 git1 coding upstream 175769 10755190 ~ 10778403 (+)
LOC110507539 ssh2 coding upstream 239219 10677850 ~ 10714953 (+)
LOC118944743 NA coding downstream 12555 10966933 ~ 10971183 (+)
LOC110507545 LOC106612642 coding downstream 17602 10971980 ~ 12125733 (+)
cd3e LOC100499597 coding downstream 1234955 12189333 ~ 12193259 (+)
LOC110507553 LOC106580818 coding downstream 1327940 12282318 ~ 12303781 (+)
apoa-i-1 apoa-i-1 coding downstream 1389427 12343805 ~ 12346332 (+)
G2050993 NA non-coding upstream 940 10952999 ~ 10953232 (+)
G2050988 NA non-coding upstream 3466 10950503 ~ 10950706 (+)
G2050394 NA non-coding upstream 114500 10834153 ~ 10839672 (+)
G2050376 NA non-coding upstream 139981 10812270 ~ 10814191 (+)
G2051041 NA non-coding downstream 47483 11001861 ~ 11002289 (+)
G2051422 NA non-coding downstream 586077 11540455 ~ 11777397 (+)
G2051500 NA non-coding downstream 677513 11631891 ~ 11697754 (+)
G2051892 NA non-coding downstream 1183802 12138180 ~ 12138453 (+)
G2051895 NA non-coding downstream 1187679 12142057 ~ 12174770 (+)
rap1gap2a LOC106580794 other upstream 371087 10494894 ~ 10583085 (+)
LOC110507524 LOC106612657 other upstream 536877 10391240 ~ 10417311 (+)
LOC110507523 LOC106580787 other upstream 563271 10384807 ~ 10390951 (+)
LOC110507067 LOC106580782 other upstream 671689 10251889 ~ 10282483 (+)
G2051034 NA other downstream 38607 10992985 ~ 10993588 (+)
G2051018 LOC106580809 other downstream 1173063 12127441 ~ 12137799 (+)
nudt8 LOC106580825 other downstream 1483581 12436060 ~ 12439501 (+)
G2053443 NA other downstream 2024149 12978527 ~ 12978923 (+)
LOC110507618 LOC107659943 other downstream 2600362 13554250 ~ 13575495 (+)

Expression


Co-expression Network