Gene
RNA
| Item | Value |
|---|---|
| gene id | G2051041 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 11001861 ~ 11002289 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2346004 | True | 255 | lncRNA | 0.37 | 2 | 11001861 | 11002289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944743 | NA | coding | upstream | 30678 | 10966933 ~ 10971183 (+) |
| LOC110507544 | LOC106580804 | coding | upstream | 88639 | 10814920 ~ 10913222 (+) |
| LOC110507543 | NA | coding | upstream | 189855 | 10809948 ~ 10812006 (+) |
| LOC110507542 | LOC106580802 | coding | upstream | 196325 | 10787642 ~ 10805536 (+) |
| LOC110507540 | git1 | coding | upstream | 223458 | 10755190 ~ 10778403 (+) |
| cd3e | LOC100499597 | coding | downstream | 1187044 | 12189333 ~ 12193259 (+) |
| LOC110507553 | LOC106580818 | coding | downstream | 1280029 | 12282318 ~ 12303781 (+) |
| apoa-i-1 | apoa-i-1 | coding | downstream | 1341516 | 12343805 ~ 12346332 (+) |
| LOC110507554 | LOC106580899 | coding | downstream | 1346096 | 12348385 ~ 12353409 (+) |
| LOC110507072 | LOC106580819 | coding | downstream | 1351268 | 12353557 ~ 12368584 (+) |
| G2050996 | NA | non-coding | upstream | 47483 | 10954172 ~ 10954378 (+) |
| G2050993 | NA | non-coding | upstream | 48629 | 10952999 ~ 10953232 (+) |
| G2050988 | NA | non-coding | upstream | 51155 | 10950503 ~ 10950706 (+) |
| G2050394 | NA | non-coding | upstream | 162189 | 10834153 ~ 10839672 (+) |
| G2051422 | NA | non-coding | downstream | 538166 | 11540455 ~ 11777397 (+) |
| G2051500 | NA | non-coding | downstream | 629602 | 11631891 ~ 11697754 (+) |
| G2051892 | NA | non-coding | downstream | 1135891 | 12138180 ~ 12138453 (+) |
| G2051895 | NA | non-coding | downstream | 1139768 | 12142057 ~ 12174770 (+) |
| G2051932 | NA | non-coding | downstream | 1204518 | 12206807 ~ 12209107 (+) |
| G2051034 | NA | other | upstream | 8273 | 10992985 ~ 10993588 (+) |
| rap1gap2a | LOC106580794 | other | upstream | 418776 | 10494894 ~ 10583085 (+) |
| LOC110507524 | LOC106612657 | other | upstream | 584566 | 10391240 ~ 10417311 (+) |
| LOC110507523 | LOC106580787 | other | upstream | 610960 | 10384807 ~ 10390951 (+) |
| G2051018 | LOC106580809 | other | downstream | 1125152 | 12127441 ~ 12137799 (+) |
| nudt8 | LOC106580825 | other | downstream | 1435670 | 12436060 ~ 12439501 (+) |
| G2053443 | NA | other | downstream | 1976238 | 12978527 ~ 12978923 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 2552451 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 3823231 | 14825520 ~ 14841123 (+) |
