G2051422


Basic Information

Item Value
gene id G2051422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 11540455 ~ 11777397 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2346398
CAGGAATATTTGCTAAAAGCAGGTGACACATGGACTTCTGCTAGCCTCTGAGGCACAACAGTGACCGATTGAAGTTAGAGGATGTGACTGAAATGTCAGTTCTGAGATgaagacatacagtggggagaacaagtatttgatacactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtcatttttatcatatgtacacttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2346398 True 215 lncRNA 0.41 2 11540455 11777397

Neighbor

gene id symbol gene type direction distance location
LOC118944743 NA coding upstream 569272 10966933 ~ 10971183 (+)
LOC110507544 LOC106580804 coding upstream 627233 10814920 ~ 10913222 (+)
LOC110507543 NA coding upstream 728449 10809948 ~ 10812006 (+)
LOC110507542 LOC106580802 coding upstream 734919 10787642 ~ 10805536 (+)
LOC110507540 git1 coding upstream 762052 10755190 ~ 10778403 (+)
cd3e LOC100499597 coding downstream 411936 12189333 ~ 12193259 (+)
LOC110507553 LOC106580818 coding downstream 504921 12282318 ~ 12303781 (+)
apoa-i-1 apoa-i-1 coding downstream 566408 12343805 ~ 12346332 (+)
LOC110507554 LOC106580899 coding downstream 570988 12348385 ~ 12353409 (+)
LOC110507072 LOC106580819 coding downstream 576160 12353557 ~ 12368584 (+)
G2051041 NA non-coding upstream 538166 11001861 ~ 11002289 (+)
G2050996 NA non-coding upstream 586077 10954172 ~ 10954378 (+)
G2050993 NA non-coding upstream 587223 10952999 ~ 10953232 (+)
G2050988 NA non-coding upstream 589749 10950503 ~ 10950706 (+)
G2051892 NA non-coding downstream 360783 12138180 ~ 12138453 (+)
G2051895 NA non-coding downstream 364660 12142057 ~ 12174770 (+)
G2051932 NA non-coding downstream 429410 12206807 ~ 12209107 (+)
G2051936 NA non-coding downstream 436731 12214128 ~ 12216225 (+)
G2051940 NA non-coding downstream 444294 12221691 ~ 12234948 (+)
G2051034 NA other upstream 546867 10992985 ~ 10993588 (+)
rap1gap2a LOC106580794 other upstream 957370 10494894 ~ 10583085 (+)
LOC110507524 LOC106612657 other upstream 1123160 10391240 ~ 10417311 (+)
LOC110507523 LOC106580787 other upstream 1149554 10384807 ~ 10390951 (+)
G2051018 LOC106580809 other downstream 350044 12127441 ~ 12137799 (+)
nudt8 LOC106580825 other downstream 660562 12436060 ~ 12439501 (+)
G2053443 NA other downstream 1201130 12978527 ~ 12978923 (+)
LOC110507618 LOC107659943 other downstream 1777343 13554250 ~ 13575495 (+)
LOC110507180 LOC106612536 other downstream 3048123 14825520 ~ 14841123 (+)

Expression


Co-expression Network