G2051500


Basic Information

Item Value
gene id G2051500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 11631891 ~ 11697754 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2346478
gtcactaaaaatccatagtacatctctcaaaagtaaatattcatgccaatgatcatgtcagtgtcatcagaatgataagtcatcaagtcattgttcacgaacaaggtcgtcaaaatgtttaggcatattgtcaatgtaactgtgtactttgacagtattacctgatgtaaacttaggctacagtttgaatgacagttactgtattgaaaatgcacaaggctgcacttctatggcatatatcaatttcaacagtactatttacattgccttgcgaaagtattcggcccccttgaactttgcgacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2346478 True 304 lncRNA 0.37 2 11631891 11697754

Neighbor

gene id symbol gene type direction distance location
LOC118944743 NA coding upstream 660708 10966933 ~ 10971183 (+)
LOC110507544 LOC106580804 coding upstream 718669 10814920 ~ 10913222 (+)
LOC110507543 NA coding upstream 819885 10809948 ~ 10812006 (+)
LOC110507542 LOC106580802 coding upstream 826355 10787642 ~ 10805536 (+)
LOC110507540 git1 coding upstream 853488 10755190 ~ 10778403 (+)
cd3e LOC100499597 coding downstream 491579 12189333 ~ 12193259 (+)
LOC110507553 LOC106580818 coding downstream 584564 12282318 ~ 12303781 (+)
apoa-i-1 apoa-i-1 coding downstream 646051 12343805 ~ 12346332 (+)
LOC110507554 LOC106580899 coding downstream 650631 12348385 ~ 12353409 (+)
LOC110507072 LOC106580819 coding downstream 655803 12353557 ~ 12368584 (+)
G2051041 NA non-coding upstream 629602 11001861 ~ 11002289 (+)
G2050996 NA non-coding upstream 677513 10954172 ~ 10954378 (+)
G2050993 NA non-coding upstream 678659 10952999 ~ 10953232 (+)
G2050988 NA non-coding upstream 681185 10950503 ~ 10950706 (+)
G2051892 NA non-coding downstream 440426 12138180 ~ 12138453 (+)
G2051895 NA non-coding downstream 444303 12142057 ~ 12174770 (+)
G2051932 NA non-coding downstream 509053 12206807 ~ 12209107 (+)
G2051936 NA non-coding downstream 516374 12214128 ~ 12216225 (+)
G2051940 NA non-coding downstream 523937 12221691 ~ 12234948 (+)
G2051034 NA other upstream 638303 10992985 ~ 10993588 (+)
rap1gap2a LOC106580794 other upstream 1048806 10494894 ~ 10583085 (+)
LOC110507524 LOC106612657 other upstream 1214596 10391240 ~ 10417311 (+)
LOC110507523 LOC106580787 other upstream 1240990 10384807 ~ 10390951 (+)
G2051018 LOC106580809 other downstream 429687 12127441 ~ 12137799 (+)
nudt8 LOC106580825 other downstream 740205 12436060 ~ 12439501 (+)
G2053443 NA other downstream 1280773 12978527 ~ 12978923 (+)
LOC110507618 LOC107659943 other downstream 1856986 13554250 ~ 13575495 (+)
LOC110507180 LOC106612536 other downstream 3127766 14825520 ~ 14841123 (+)

Expression


Co-expression Network