G2051018 (LOC106580809)


Basic Information

Item Value
gene id G2051018
gene name LOC106580809
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 12127441 ~ 12137799 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2345979
CACATTGCTTTATTTTGAAAACAGACAttgaaatcattttttttttctcacaattTATCTCCTTAGATTCAAACTGGACATTGCACTCACTGGAACATAGGAAACGTTTTTTAGTTTTGTTTGTTTGATTTTCTTTTTAACATCAGTGCAAGAGTAATTCCAATTCATATCAAACCGTCATAACAACACCAAGGACATCAAAGAGAAGCCACATTTTCTTTTGTATTGTGACTGCGAAAAGTTCCTCTTAGCAGAAGAGTTCCCATGCAAGTTGTTAGATGGTTCATGCTAATCATGTAATTTGGAAGGGGGATTTTAGTTGTGGGGTCAACAACATGTCATAGTACTCATTGTTTTCCGTAAAGTCGTGAAAATCATGTCAGACTTGTTAGTTTTATAAGTGCGGAAGGAGAAGGACCTGTTACTCAAAGAACGTAAACCAAGCTTGATCAACTCAAGCAGAATATGAAAATGTCCTGTCCCGCTTTGTAGGGTTTTGAAACTCAGTTCAAAATGTGGATAGGTCCAACCATCGAATCAATAATGTAAGATACAGAACATACCCAAATCATACCACTTATAGCTTGAACCAAAAAACGCATGTTGGAAACTCTCCCAACGTAAGAAAATCATCGCCACACAAAAAATGACAAACAAATAAAAATGGACTGCCTTCACATTCAGAAGGAGAAGAGTCACCCTTTAAATTCATTTGTAATCATAGTATTTTTTTCTCTATGTTAAACTTTCGCTTGGTCCTCCTTGGACTCCTCCTGGACTGCCTCTGCTGGAGCCTCAGCTGGTTGGGATTCTTCGGCACCATCTTTTTTTGTCTTGTGTTTGGTGAGGCTCCTCCTTATCAGCCGTCTCACTGACAGGAGCAGCAGGCACGTCGGCTTGTTTGGACTCCTCCTGGGCAGCACCACCCTCCACACTCTTTTCAGCACAATCAGTAGAGGGGTTTTGGGCAGAAACCGGAACCTCATTGCTGTCCACCTCTTTGGGCTTCTCCTTGGTGTCGCCGGGCTCCACCTTGGCCTCCTCTTTGGAAGGCTCTGAAGGCGCCGCGGTGGGAGAAGCTGTTGCTGCGGCTACGGGAGAGGTGGCGACAGGGGCAGGAGAGTTTGCTGCCTTTTCTGAGATGGGGCTTTTGGCTTGGCtcgtctcctcctctttaatccCAGGGGGGGCTTTTTCCTCGGCAGCCTGCTCAGCCGCAGTGGGGacgtcctccttctcctcttctccatctgcCATCTCCTTCGTCTCCTCCTCTGGGACAGCTGGACTggcctcctcatcctcctctccatctttcaTTTTTTTCCGGAGTATGTGTCCACGGAAGCTGGCCTGGATTTTGGTGGCCGCCTTGTGGGCTTTGTCCTCTGGTTTCTTCTCATCCTGCTTGATTTCCTGGTCTTCTTATGCAGCACAGCATACTTGTAATatcctttctctcttttcccttctttccttcctttttGCCTTacacttctctctcactccctcgctctcGCGCTCTTGCACACGCTCACTGGCTGTATCAACAGCTGAGTCGCCTAATGCTTTTACTCATCACAatttgcacacacactcactgtctgCCTGCTCGCGCCTCtctctgacttgctggctaacaATGACTACAAGCC

Function

NR:

description
neuromodulin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2345979 True 1655 TUCP 0.46 3 12127441 12137799

Neighbor

gene id symbol gene type direction distance location
LOC110507545 LOC106612642 coding upstream 1708 10971980 ~ 12125733 (+)
LOC118944743 NA coding upstream 1156258 10966933 ~ 10971183 (+)
LOC110507544 LOC106580804 coding upstream 1214219 10814920 ~ 10913222 (+)
LOC110507543 NA coding upstream 1315435 10809948 ~ 10812006 (+)
LOC110507542 LOC106580802 coding upstream 1321905 10787642 ~ 10805536 (+)
cd3e LOC100499597 coding downstream 51534 12189333 ~ 12193259 (+)
LOC110507553 LOC106580818 coding downstream 144519 12282318 ~ 12303781 (+)
apoa-i-1 apoa-i-1 coding downstream 206006 12343805 ~ 12346332 (+)
LOC110507554 LOC106580899 coding downstream 210586 12348385 ~ 12353409 (+)
LOC110507072 LOC106580819 coding downstream 215758 12353557 ~ 12368584 (+)
G2051422 NA non-coding upstream 350044 11540455 ~ 11777397 (+)
G2051500 NA non-coding upstream 429687 11631891 ~ 11697754 (+)
G2051041 NA non-coding upstream 1125152 11001861 ~ 11002289 (+)
G2050996 NA non-coding upstream 1173063 10954172 ~ 10954378 (+)
G2050993 NA non-coding upstream 1174209 10952999 ~ 10953232 (+)
G2051892 NA non-coding downstream 381 12138180 ~ 12138453 (+)
G2051895 NA non-coding downstream 4258 12142057 ~ 12174770 (+)
G2051932 NA non-coding downstream 69008 12206807 ~ 12209107 (+)
G2051936 NA non-coding downstream 76329 12214128 ~ 12216225 (+)
G2051940 NA non-coding downstream 83892 12221691 ~ 12234948 (+)
G2051034 NA other upstream 1133853 10992985 ~ 10993588 (+)
LOC110507540 git1 other upstream 1349074 10755190 ~ 10778403 (+)
rap1gap2a LOC106580794 other upstream 1544356 10494894 ~ 10583085 (+)
LOC110507524 LOC106612657 other upstream 1710146 10391240 ~ 10417311 (+)
LOC110507523 LOC106580787 other upstream 1736540 10384807 ~ 10390951 (+)
nudt8 LOC106580825 other downstream 300160 12436060 ~ 12439501 (+)
G2053443 NA other downstream 840728 12978527 ~ 12978923 (+)
LOC110507618 LOC107659943 other downstream 1416941 13554250 ~ 13575495 (+)
LOC110507180 LOC106612536 other downstream 2687721 14825520 ~ 14841123 (+)
G2056256 NA other downstream 3459234 15597033 ~ 15597651 (+)

Expression


Co-expression Network