Gene
RNA
| Item | Value |
|---|---|
| gene id | G2052080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 12489470 ~ 12515979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2347096 | True | 524 | lncRNA | 0.53 | 4 | 12489470 | 12515979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507560 | LOC106580827 | coding | upstream | 14234 | 12466557 ~ 12475236 (+) |
| si:ch1073-280e3.1 | bfc2-b | coding | upstream | 28140 | 12448946 ~ 12461330 (+) |
| nudt8 | LOC106580825 | coding | upstream | 49969 | 12436060 ~ 12439501 (+) |
| pcsk7 | LOC106580820 | coding | upstream | 92703 | 12374563 ~ 12396767 (+) |
| LOC110507072 | LOC106580819 | coding | upstream | 120886 | 12353557 ~ 12368584 (+) |
| LOC110507563 | LOC106580829 | coding | downstream | 66277 | 12582256 ~ 12593139 (+) |
| LOC110507566 | LOC106580832 | coding | downstream | 178922 | 12694901 ~ 12706764 (+) |
| LOC110507570 | LOC106580836 | coding | downstream | 204890 | 12720869 ~ 12742117 (+) |
| LOC110507572 | LOC106580837 | coding | downstream | 233538 | 12749517 ~ 12752428 (+) |
| LOC118944739 | NA | coding | downstream | 266277 | 12782256 ~ 12791115 (+) |
| G2052088 | NA | non-coding | upstream | 2347 | 12483803 ~ 12487123 (+) |
| G2052075 | NA | non-coding | upstream | 25615 | 12463615 ~ 12463855 (+) |
| G2051996 | NA | non-coding | upstream | 86915 | 12398512 ~ 12402555 (+) |
| LOC110507554 | LOC106580899 | non-coding | upstream | 136101 | 12348385 ~ 12353409 (+) |
| G2051958 | NA | non-coding | upstream | 147404 | 12307511 ~ 12342066 (+) |
| G2052104 | NA | non-coding | downstream | 13410 | 12529389 ~ 12529624 (+) |
| G2052105 | NA | non-coding | downstream | 14987 | 12530966 ~ 12531207 (+) |
| G2052106 | NA | non-coding | downstream | 18355 | 12534334 ~ 12535671 (+) |
| G2053127 | NA | non-coding | downstream | 62937 | 12578916 ~ 12579246 (+) |
| G2053142 | NA | non-coding | downstream | 78145 | 12594124 ~ 12651020 (+) |
| G2051018 | LOC106580809 | other | upstream | 351671 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 1495882 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 1711103 | 10755190 ~ 10778403 (+) |
| rap1gap2a | LOC106580794 | other | upstream | 1906385 | 10494894 ~ 10583085 (+) |
| G2053443 | NA | other | downstream | 462548 | 12978527 ~ 12978923 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 1038761 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 2309541 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 3081054 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 3553591 | 15776205 ~ 16131560 (+) |
