Gene
RNA
| Item | Value |
|---|---|
| gene id | G2052101 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 12513634 ~ 12519150 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2347117 | True | 743 | lncRNA | 0.51 | 3 | 12513634 | 12519150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507560 | LOC106580827 | coding | upstream | 38398 | 12466557 ~ 12475236 (+) |
| si:ch1073-280e3.1 | bfc2-b | coding | upstream | 52304 | 12448946 ~ 12461330 (+) |
| nudt8 | LOC106580825 | coding | upstream | 74133 | 12436060 ~ 12439501 (+) |
| pcsk7 | LOC106580820 | coding | upstream | 116867 | 12374563 ~ 12396767 (+) |
| LOC110507072 | LOC106580819 | coding | upstream | 145050 | 12353557 ~ 12368584 (+) |
| LOC110507563 | LOC106580829 | coding | downstream | 63106 | 12582256 ~ 12593139 (+) |
| LOC110507566 | LOC106580832 | coding | downstream | 175751 | 12694901 ~ 12706764 (+) |
| LOC110507570 | LOC106580836 | coding | downstream | 201719 | 12720869 ~ 12742117 (+) |
| LOC110507572 | LOC106580837 | coding | downstream | 230367 | 12749517 ~ 12752428 (+) |
| LOC118944739 | NA | coding | downstream | 263106 | 12782256 ~ 12791115 (+) |
| G2052088 | NA | non-coding | upstream | 26511 | 12483803 ~ 12487123 (+) |
| G2052075 | NA | non-coding | upstream | 49779 | 12463615 ~ 12463855 (+) |
| G2051996 | NA | non-coding | upstream | 111079 | 12398512 ~ 12402555 (+) |
| LOC110507554 | LOC106580899 | non-coding | upstream | 160265 | 12348385 ~ 12353409 (+) |
| G2052014 | NA | non-coding | upstream | 199657 | 12313328 ~ 12313977 (+) |
| G2052104 | NA | non-coding | downstream | 10239 | 12529389 ~ 12529624 (+) |
| G2052105 | NA | non-coding | downstream | 11816 | 12530966 ~ 12531207 (+) |
| G2052106 | NA | non-coding | downstream | 15184 | 12534334 ~ 12535671 (+) |
| G2053127 | NA | non-coding | downstream | 59766 | 12578916 ~ 12579246 (+) |
| G2053142 | NA | non-coding | downstream | 74974 | 12594124 ~ 12651020 (+) |
| G2051018 | LOC106580809 | other | upstream | 375835 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 1520046 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 1735267 | 10755190 ~ 10778403 (+) |
| rap1gap2a | LOC106580794 | other | upstream | 1930549 | 10494894 ~ 10583085 (+) |
| G2053443 | NA | other | downstream | 459377 | 12978527 ~ 12978923 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 1035590 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 2306370 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 3077883 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 3550420 | 15776205 ~ 16131560 (+) |
