G2052104


Basic Information

Item Value
gene id G2052104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 12529389 ~ 12529624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2347120
AGGTGATGATGTTATCCACTTTAAATAGAAGGGACATGTTCGTTTTTTGTGCAAACAGAAATTCCAAGCTTTTATGGTCTCTGTACTTGACAAACCTATACCTCCATAAGTCTCTGTGCTTGACAAACCtgtacctccatcagtctctgtgCTTGACAAACCtatacctccatcagtctctgtgCTTGACAAACCaatacctccatcagtctctgtgCTTGACAAACATATACCTC

Function

NR:

description
PREDICTED: mucin-17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2347120 True 236 lncRNA 0.41 1 12529389 12529624

Neighbor

gene id symbol gene type direction distance location
LOC110507560 LOC106580827 coding upstream 54153 12466557 ~ 12475236 (+)
si:ch1073-280e3.1 bfc2-b coding upstream 68059 12448946 ~ 12461330 (+)
nudt8 LOC106580825 coding upstream 89888 12436060 ~ 12439501 (+)
pcsk7 LOC106580820 coding upstream 132622 12374563 ~ 12396767 (+)
LOC110507072 LOC106580819 coding upstream 160805 12353557 ~ 12368584 (+)
LOC110507563 LOC106580829 coding downstream 52632 12582256 ~ 12593139 (+)
LOC110507566 LOC106580832 coding downstream 165277 12694901 ~ 12706764 (+)
LOC110507570 LOC106580836 coding downstream 191245 12720869 ~ 12742117 (+)
LOC110507572 LOC106580837 coding downstream 219893 12749517 ~ 12752428 (+)
LOC118944739 NA coding downstream 252632 12782256 ~ 12791115 (+)
G2052101 NA non-coding upstream 10239 12513634 ~ 12519150 (+)
G2052080 NA non-coding upstream 13410 12489470 ~ 12515979 (+)
G2052088 NA non-coding upstream 42266 12483803 ~ 12487123 (+)
G2052075 NA non-coding upstream 65534 12463615 ~ 12463855 (+)
G2051996 NA non-coding upstream 126834 12398512 ~ 12402555 (+)
G2052105 NA non-coding downstream 1342 12530966 ~ 12531207 (+)
G2052106 NA non-coding downstream 4710 12534334 ~ 12535671 (+)
G2053127 NA non-coding downstream 49292 12578916 ~ 12579246 (+)
G2053142 NA non-coding downstream 64500 12594124 ~ 12651020 (+)
G2053202 NA non-coding downstream 152562 12682186 ~ 12692118 (+)
G2051018 LOC106580809 other upstream 391590 12127441 ~ 12137799 (+)
G2051034 NA other upstream 1535801 10992985 ~ 10993588 (+)
LOC110507540 git1 other upstream 1751022 10755190 ~ 10778403 (+)
rap1gap2a LOC106580794 other upstream 1946304 10494894 ~ 10583085 (+)
G2053443 NA other downstream 448903 12978527 ~ 12978923 (+)
LOC110507618 LOC107659943 other downstream 1025116 13554250 ~ 13575495 (+)
LOC110507180 LOC106612536 other downstream 2295896 14825520 ~ 14841123 (+)
G2056256 NA other downstream 3067409 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 3539946 15776205 ~ 16131560 (+)

Expression


Co-expression Network