Gene
RNA
| Item | Value |
|---|---|
| gene id | G2053240 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 12748034 ~ 12748302 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2348347 | True | 269 | lncRNA | 0.36 | 1 | 12748034 | 12748302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507570 | LOC106580836 | coding | upstream | 5917 | 12720869 ~ 12742117 (+) |
| LOC110507566 | LOC106580832 | coding | upstream | 41270 | 12694901 ~ 12706764 (+) |
| LOC110507563 | LOC106580829 | coding | upstream | 154895 | 12582256 ~ 12593139 (+) |
| LOC110507560 | LOC106580827 | coding | upstream | 272798 | 12466557 ~ 12475236 (+) |
| si:ch1073-280e3.1 | bfc2-b | coding | upstream | 286704 | 12448946 ~ 12461330 (+) |
| LOC110507572 | LOC106580837 | coding | downstream | 1215 | 12749517 ~ 12752428 (+) |
| LOC118944739 | NA | coding | downstream | 33954 | 12782256 ~ 12791115 (+) |
| trnaa-ugc-186 | NA | coding | downstream | 47293 | 12795595 ~ 12795670 (+) |
| nop53 | LOC106612613 | coding | downstream | 54139 | 12802441 ~ 12814037 (+) |
| LOC110507577 | LOC106580842 | coding | downstream | 68884 | 12817186 ~ 12855301 (+) |
| G2053239 | NA | non-coding | upstream | 215 | 12747146 ~ 12747819 (+) |
| G2053223 | NA | non-coding | upstream | 21541 | 12725613 ~ 12726493 (+) |
| G2053222 | NA | non-coding | upstream | 22975 | 12724371 ~ 12725059 (+) |
| G2053230 | LOC106580833 | non-coding | upstream | 30301 | 12716904 ~ 12717733 (+) |
| G2053202 | NA | non-coding | upstream | 55916 | 12682186 ~ 12692118 (+) |
| G2053243 | NA | non-coding | downstream | 6182 | 12754484 ~ 12754786 (+) |
| G2053249 | NA | non-coding | downstream | 23131 | 12771433 ~ 12771637 (+) |
| G2053205 | NA | non-coding | downstream | 34078 | 12782380 ~ 12795742 (+) |
| G2053382 | NA | non-coding | downstream | 126165 | 12874467 ~ 12924756 (+) |
| G2053387 | NA | non-coding | downstream | 201099 | 12949401 ~ 12952410 (+) |
| nudt8 | LOC106580825 | other | upstream | 308556 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 610235 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 1754446 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 1969667 | 10755190 ~ 10778403 (+) |
| rap1gap2a | LOC106580794 | other | upstream | 2164949 | 10494894 ~ 10583085 (+) |
| G2053443 | NA | other | downstream | 230225 | 12978527 ~ 12978923 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 806438 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 2077218 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 2848731 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 3321268 | 15776205 ~ 16131560 (+) |
