Gene
RNA
| Item | Value |
|---|---|
| gene id | G2053510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 13112925 ~ 13113560 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2348654 | True | 636 | lncRNA | 0.45 | 1 | 13112925 | 13113560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944675 | NA | coding | upstream | 37407 | 13065291 ~ 13075518 (+) |
| LOC110507586 | LOC106565025 | coding | upstream | 124387 | 12987564 ~ 12988797 (+) |
| rinl | rinl | coding | upstream | 220316 | 12880635 ~ 12892609 (+) |
| sirt2 | sirt2 | coding | upstream | 232417 | 12875801 ~ 12880508 (+) |
| LOC110507577 | LOC106580842 | coding | upstream | 257624 | 12817186 ~ 12855301 (+) |
| LOC110507591 | map4k1 | coding | downstream | 84295 | 13197855 ~ 13216273 (+) |
| LOC110507592 | LOC106580858 | coding | downstream | 102919 | 13216479 ~ 13222270 (+) |
| LOC110507593 | hif1a | coding | downstream | 119971 | 13233531 ~ 13264437 (+) |
| LOC118944728 | LOC106580863 | coding | downstream | 239169 | 13352729 ~ 13365310 (+) |
| LOC110507076 | LOC106580865 | coding | downstream | 272489 | 13386049 ~ 13404009 (+) |
| G2053509 | NA | non-coding | upstream | 26 | 13112241 ~ 13112899 (+) |
| G2053478 | NA | non-coding | upstream | 76283 | 13036418 ~ 13036642 (+) |
| G2053477 | NA | non-coding | upstream | 78837 | 13033557 ~ 13034088 (+) |
| G2053460 | LOC106580848 | non-coding | upstream | 108996 | 13003462 ~ 13003929 (+) |
| G2053455 | LOC106612604 | non-coding | upstream | 120118 | 12992590 ~ 12992807 (+) |
| G2053514 | NA | non-coding | downstream | 246 | 13113806 ~ 13115066 (+) |
| G2053511 | NA | non-coding | downstream | 1643 | 13115203 ~ 13123073 (+) |
| G2053513 | actn4 | non-coding | downstream | 12735 | 13126295 ~ 13135347 (+) |
| G2053540 | NA | non-coding | downstream | 69757 | 13183317 ~ 13186095 (+) |
| G2053443 | NA | other | upstream | 134002 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 673447 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 975126 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 2119337 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 2334558 | 10755190 ~ 10778403 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 441180 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 1711960 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 2483473 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 2956010 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 3260706 | 16374266 ~ 16376043 (+) |
