Gene
RNA
| Item | Value |
|---|---|
| gene id | G2053564 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 13231506 ~ 13231866 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2348720 | True | 361 | lncRNA | 0.38 | 1 | 13231506 | 13231866 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507592 | LOC106580858 | coding | upstream | 9236 | 13216479 ~ 13222270 (+) |
| LOC110507591 | map4k1 | coding | upstream | 15233 | 13197855 ~ 13216273 (+) |
| LOC118944675 | NA | coding | upstream | 155988 | 13065291 ~ 13075518 (+) |
| LOC110507586 | LOC106565025 | coding | upstream | 242968 | 12987564 ~ 12988797 (+) |
| rinl | rinl | coding | upstream | 338897 | 12880635 ~ 12892609 (+) |
| LOC110507593 | hif1a | coding | downstream | 1665 | 13233531 ~ 13264437 (+) |
| LOC118944728 | LOC106580863 | coding | downstream | 120863 | 13352729 ~ 13365310 (+) |
| LOC110507076 | LOC106580865 | coding | downstream | 154183 | 13386049 ~ 13404009 (+) |
| LOC110507600 | LOC106580866 | coding | downstream | 186364 | 13418230 ~ 13425382 (+) |
| LOC110507601 | ercc2 | coding | downstream | 199607 | 13431473 ~ 13439015 (+) |
| G2053563 | NA | non-coding | upstream | 1175 | 13230096 ~ 13230331 (+) |
| G2053540 | NA | non-coding | upstream | 45411 | 13183317 ~ 13186095 (+) |
| G2053513 | actn4 | non-coding | upstream | 96159 | 13126295 ~ 13135347 (+) |
| G2053511 | NA | non-coding | upstream | 108433 | 13115203 ~ 13123073 (+) |
| G2053565 | NA | non-coding | downstream | 115 | 13231981 ~ 13232330 (+) |
| G2053583 | NA | non-coding | downstream | 44124 | 13275990 ~ 13278488 (+) |
| G2053622 | NA | non-coding | downstream | 91369 | 13323235 ~ 13323660 (+) |
| G2053639 | NA | non-coding | downstream | 113767 | 13345633 ~ 13345860 (+) |
| G2053650 | NA | non-coding | downstream | 128220 | 13360086 ~ 13361770 (+) |
| G2053443 | NA | other | upstream | 252583 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 792028 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 1093707 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 2237918 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 2453139 | 10755190 ~ 10778403 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 322874 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 1593654 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 2365167 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 2837704 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 3142400 | 16374266 ~ 16376043 (+) |
