Gene
RNA
| Item | Value |
|---|---|
| gene id | G2053653 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 13367749 ~ 13367972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2348819 | True | 224 | lncRNA | 0.38 | 1 | 13367749 | 13367972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944728 | LOC106580863 | coding | upstream | 2439 | 13352729 ~ 13365310 (+) |
| LOC110507593 | hif1a | coding | upstream | 103312 | 13233531 ~ 13264437 (+) |
| LOC110507592 | LOC106580858 | coding | upstream | 145479 | 13216479 ~ 13222270 (+) |
| LOC110507591 | map4k1 | coding | upstream | 151476 | 13197855 ~ 13216273 (+) |
| LOC118944675 | NA | coding | upstream | 292231 | 13065291 ~ 13075518 (+) |
| LOC110507076 | LOC106580865 | coding | downstream | 18077 | 13386049 ~ 13404009 (+) |
| LOC110507600 | LOC106580866 | coding | downstream | 50258 | 13418230 ~ 13425382 (+) |
| LOC110507601 | ercc2 | coding | downstream | 63501 | 13431473 ~ 13439015 (+) |
| ckmb | LOC106612591 | coding | downstream | 100230 | 13468202 ~ 13471952 (+) |
| LOC110507607 | LOC106580870 | coding | downstream | 163512 | 13531054 ~ 13534857 (+) |
| G2053650 | NA | non-coding | upstream | 5979 | 13360086 ~ 13361770 (+) |
| G2053639 | NA | non-coding | upstream | 21889 | 13345633 ~ 13345860 (+) |
| G2053622 | NA | non-coding | upstream | 44089 | 13323235 ~ 13323660 (+) |
| G2053583 | NA | non-coding | upstream | 89261 | 13275990 ~ 13278488 (+) |
| G2053679 | NA | non-coding | downstream | 58824 | 13426796 ~ 13427150 (+) |
| G2053699 | NA | non-coding | downstream | 104479 | 13472451 ~ 13475702 (+) |
| G2053706 | NA | non-coding | downstream | 117919 | 13485891 ~ 13486186 (+) |
| G2053707 | LOC106580867 | non-coding | downstream | 118271 | 13486243 ~ 13486856 (+) |
| G2053443 | NA | other | upstream | 388826 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 928271 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 1229950 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 2374161 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 2589382 | 10755190 ~ 10778403 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 186768 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 1457548 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 2229061 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 2701598 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 3006294 | 16374266 ~ 16376043 (+) |
