G2053699


Basic Information

Item Value
gene id G2053699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 13472451 ~ 13475702 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2348867
ACACAATTTTCCTATGAGACATGCAGGACTGCAGGTCAGTCATTTCCATATTTGCACCCCGTTTTATCGATAACAGCGACGGCTTCAAACGCTCTACTACTTCCTACCGTTGAAGCATGGTCCTAAGCTTTAAGCAATATATATGGGAATTGTTGGGCAAGAGGTCCTATTTTGGGCAAAGTTGCCCAAAAATTGCACAAAATCACAGCTTTCACATTTTAAGACATTTGTGGCCACCTGTTGCAAATAAAATCTCCCATGATTCCTTGCAACGGGAAAACTGAAGTCATTGTAGTGTCATGGATTACTATGTACTACCGCCATACATGTGTGCAATAAATCTTTTTACCAAAAGGAATAAGGTGGAAAATGGAGTTTGAAAACAACTGAAGATTTGTTATTGTGTTGGGCAGGCAGTCCAGTGTAGGCAGGCTGGCGGAAATGGTCAGAGGTGTAACAGTGACAAACAAGCACACTCTGTAATGAGAACATCATCCACTGTTGATGAATCTTTGAGCCATTTACAAAGGCCAGACAGACTTTCAGAAAACAAGGAAGGTTGAGGAACATTCAGCGACACCAACAACACAGTCTGAGCTGAGAAAATAGAAACATGGTTGAGAGATCTAAACTAGAAGAGCCCACTGCAGCAACTGGGAACGATGTTCTGGCATGTCTGCTGCTATGACCCACTGACAGGCGACAAGGATCATTACTGTATATTGGTGCAAATCAAAGCTGTGACAAACAGTCAAGGCCGGAGTGAGTGACTATCTACCTGACTTGGATCAATTGTGAGCAGCTTGGAATCGTGGTTCATTTATAGAAGAGTGTCAGGGTTAATTTCAACAAGGTCACCCAGGGTCACATTCTAAACTACCCCCCCTCAGCAATACAGAAGTCTGATTGGCTACCAGAAGGGAAGCTCAGTGTTGCCGAGGGCTGTGTTGAGGAGCAGTTCGGAACTCATCCTCCAGGGAACCACAGATAAAGGACATCAATGGACATAAATAGTTAATGCAATTCAACTAGCGTTGCTGTAGTTATTATAGTCTGTTTGATCAATCATATCCTTTTCTTTTTGAGCAGAAAATTAGGAATTGATGTCATTTTCTTTTTTATGCGATCTTGGGTCTTTTTATACTAAAAAGTGATCCAAATTGTGATTGTGGAAATGTGACAATCAATATTCCCCAACATAATACTAAACACAGCTTACATCAAATCAAGTTTGGAATCTTGGCCCTGTGGATGTGCTGTACCATTTAAGAGGAAATACAATTACAAGAGGTGATATTGCTAAACCAAAAGTGTTACCAGAAGAATGTGTAGAAAGCTTGTGTACATTACCTGCTGAAACGCAGAAAATCAAAAGGTTAGTGGCTCAGAAGAGCAGTCATCACCTACTCCGCTTTGGACATTGATGTCAGACAGCCTTGCTCATTAGCAACCAACATTCCGGTATATACAGAACACAAAATGAAACTTGATGAGAGTAGCAGACGGGGTCGTACAGAATTGAGCAGACGATGGATGGGCAGAAGGGTCTGGCATTTGTTTTACAGAATATTTTTataatattttttgttgtccGTCTCTGTATTTCGGCACGGCTTCCTATATAGCAGGGGTGTCAAATTATATGGCCTGCGGTGCGCGAGGGGGTCCAATCTGGCCTGCGGGTTTGAGTAAAACCCCacaaaaataacaacaaaaaattagtattttttttatatatctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatttagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtttatagcctccacattgactctgtaccggtaccccctgtttatagccccGCTACtgatatttactgctgctctttagttatttgttattcttatctctttataggtattttcttaaaactgcattgttggttaagggtacgtaagcatttcacagtaaggtcatgtgacaaataaaatttgattttgaaaatatttaaaaatgacTACAGCCAAATcgaaactgtgtagaaatgataagataatggacctacattcatacagtttattGATTGTGTCCAGATTGTTAATAATCActgaaatgaaagctagacagttAGGGAGCATCAAAAATGCAAAAAAATTATGGATAGGGTGGATAGACAATTTTATGCAAATTTTGACGGCAAggaaatataacacattttcagTGTTGCCGTCCGGACCTCGTTGAAGAACGAATGTGGCGTCCAgggcaaaatgagtttgacacccctgctctatagCCTGGAGTTCTGTCTAGGAAAGGGCTGGCCCCTTGTTTCTTAAATATGCATTCAGTCTGTCAATTGCTCATTGAAGTGaagaaaagaaaaacaatatTAAAAACCTTTTAAATAGCAGCTGTTAAAAAGGAATGACAacaaatataatataatcataacTACGTTGACAAAAAATATCTTAATCTGCAAATATGGAATTAAAAAAGAACTGCTTGACTCCCTAGATTCACATAATATTGAGGTGCCTTAGCAGGGTTCATAGGTCATAGGTCTGTGAGTGGCGGGGCCGGGCCGTCCGTGCCGGTGTGCCTGCGTGTCCGTGTGGCACCAGAAGCGGGTCTTTGGCGGGGGTGAGGTGAGGTTGGCAGTGGGGGTAGCGGGTTCAGTCTGTCTCCTTCTCCCGCCCCCTTGGTCAGTCTGTCCAGTGTAGAAGCCCTCTGCCCCACCCCCTGTTGCCCTCAGAGCTCCAGATCTTTGGACACTTTTGTGGCGATATCCCGGAAGGCGAGCGGCGCCCCCCACAGGCGTTTGAAGCGCACGCCGCTGGTCTCGGCTGGACCGGCGGGCAGCTGGCACACCTCAGCCTCGAAGGCCACGCGTGAGCCGGCCGCCCCGTGGGTGCAGGAGAGCAGGAAGGGCCCAGCCAGGTGGACCTGGCAGCCGCAGCCCTGGGCCGCCTCGCGCAGCGCCAGCACCACCTCCGCCGGGTCCCGCGGGCTCCGCACCCTCACATCCCAGCCGCATCGGGGGGTCCGGGGCTCTGGCGCTTTTTGATGCC

Function

NR:

description
MAP/microtubule affinity-regulating kinase 4-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2348867 True 3252 lncRNA 0.45 1 13472451 13475702

Neighbor

gene id symbol gene type direction distance location
ckmb LOC106612591 coding upstream 499 13468202 ~ 13471952 (+)
LOC110507601 ercc2 coding upstream 33436 13431473 ~ 13439015 (+)
LOC110507600 LOC106580866 coding upstream 47069 13418230 ~ 13425382 (+)
LOC110507076 LOC106580865 coding upstream 68442 13386049 ~ 13404009 (+)
LOC118944728 LOC106580863 coding upstream 107141 13352729 ~ 13365310 (+)
LOC110507607 LOC106580870 coding downstream 55782 13531054 ~ 13534857 (+)
LOC110507618 LOC107659943 coding downstream 78548 13554250 ~ 13575495 (+)
LOC110507617 LOC106580880 coding downstream 166317 13642019 ~ 13645557 (+)
LOC118944673 NA coding downstream 172016 13647718 ~ 13648373 (+)
LOC110507609 LOC106580871 coding downstream 181018 13656720 ~ 13682463 (+)
G2053679 NA non-coding upstream 45301 13426796 ~ 13427150 (+)
G2053653 NA non-coding upstream 104479 13367749 ~ 13367972 (+)
G2053650 NA non-coding upstream 110681 13360086 ~ 13361770 (+)
G2053706 NA non-coding downstream 10189 13485891 ~ 13486186 (+)
G2053707 LOC106580867 non-coding downstream 10541 13486243 ~ 13486856 (+)
G2053709 NA non-coding downstream 13931 13489633 ~ 13489971 (+)
G2053710 LOC106580867 non-coding downstream 15071 13490773 ~ 13508651 (+)
G2053443 NA other upstream 493528 12978527 ~ 12978923 (+)
nudt8 LOC106580825 other upstream 1032973 12436060 ~ 12439501 (+)
G2051018 LOC106580809 other upstream 1334652 12127441 ~ 12137799 (+)
G2051034 NA other upstream 2478863 10992985 ~ 10993588 (+)
LOC110507540 git1 other upstream 2694084 10755190 ~ 10778403 (+)
LOC110507180 LOC106612536 other downstream 1349818 14825520 ~ 14841123 (+)
G2056256 NA other downstream 2121331 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 2593868 15776205 ~ 16131560 (+)
G2056820 NA other downstream 2898564 16374266 ~ 16376043 (+)

Expression


Co-expression Network