Gene
RNA
| Item | Value |
|---|---|
| gene id | G2053706 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 13485891 ~ 13486186 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2348874 | True | 296 | lncRNA | 0.46 | 1 | 13485891 | 13486186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ckmb | LOC106612591 | coding | upstream | 13939 | 13468202 ~ 13471952 (+) |
| LOC110507601 | ercc2 | coding | upstream | 46876 | 13431473 ~ 13439015 (+) |
| LOC110507600 | LOC106580866 | coding | upstream | 60509 | 13418230 ~ 13425382 (+) |
| LOC110507076 | LOC106580865 | coding | upstream | 81882 | 13386049 ~ 13404009 (+) |
| LOC118944728 | LOC106580863 | coding | upstream | 120581 | 13352729 ~ 13365310 (+) |
| LOC110507607 | LOC106580870 | coding | downstream | 45298 | 13531054 ~ 13534857 (+) |
| LOC110507618 | LOC107659943 | coding | downstream | 68064 | 13554250 ~ 13575495 (+) |
| LOC110507617 | LOC106580880 | coding | downstream | 155833 | 13642019 ~ 13645557 (+) |
| LOC118944673 | NA | coding | downstream | 161532 | 13647718 ~ 13648373 (+) |
| LOC110507609 | LOC106580871 | coding | downstream | 170534 | 13656720 ~ 13682463 (+) |
| G2053699 | NA | non-coding | upstream | 10189 | 13472451 ~ 13475702 (+) |
| G2053679 | NA | non-coding | upstream | 58741 | 13426796 ~ 13427150 (+) |
| G2053653 | NA | non-coding | upstream | 117919 | 13367749 ~ 13367972 (+) |
| G2053707 | LOC106580867 | non-coding | downstream | 57 | 13486243 ~ 13486856 (+) |
| G2053709 | NA | non-coding | downstream | 3447 | 13489633 ~ 13489971 (+) |
| G2053710 | LOC106580867 | non-coding | downstream | 4587 | 13490773 ~ 13508651 (+) |
| G2053756 | NA | non-coding | downstream | 78594 | 13564780 ~ 13565323 (+) |
| G2053443 | NA | other | upstream | 506968 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 1046413 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 1348092 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 2492303 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 2707524 | 10755190 ~ 10778403 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 1339334 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 2110847 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 2583384 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 2888080 | 16374266 ~ 16376043 (+) |
