G2054713


Basic Information

Item Value
gene id G2054713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 14145055 ~ 14145299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2350008
acagtggcttgcgaaattattcacccccttggcatttttcctattttgttgccttacaacctggaattaaaatggatttttgggggggattgtaTCATGCcttccactttgaagatgcaaaatattttttcttgtgaaacaaacaagaaataagacaaaaaaactgaacttgagcgtgcataactattcatcccccaaagtcaatactttgtaaatCCACCTttcgcagcaattacagctgcaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2350008 True 245 lncRNA 0.38 1 14145055 14145299

Neighbor

gene id symbol gene type direction distance location
LOC110507623 pid1 coding upstream 31474 14060874 ~ 14113581 (+)
LOC110507622 LOC106580885 coding upstream 85793 13991372 ~ 14059262 (+)
LOC110507608 LOC106580884 coding upstream 159446 13941188 ~ 13985609 (+)
LOC110507620 NA coding upstream 208267 13917001 ~ 13936788 (+)
LOC110507624 LOC106580907 coding downstream 116756 14262055 ~ 14344492 (+)
LOC110507182 LOC106580908 coding downstream 221210 14366509 ~ 14370728 (+)
LOC110507081 LOC106612519 coding downstream 225864 14371163 ~ 14372310 (+)
LOC110507158 LOC106580945 coding downstream 299080 14444379 ~ 14526200 (+)
LOC110507181 LOC106580921 coding downstream 597764 14743063 ~ 14775758 (+)
G2054710 NA non-coding upstream 1823 14142984 ~ 14143232 (+)
G2054694 NA non-coding upstream 15803 14128532 ~ 14129252 (+)
G2054689 NA non-coding upstream 18575 14126126 ~ 14126480 (+)
G2054688 NA non-coding upstream 19110 14125716 ~ 14125945 (+)
G2054686 NA non-coding upstream 20016 14124837 ~ 14125039 (+)
G2054747 NA non-coding downstream 25728 14171027 ~ 14171232 (+)
G2054765 NA non-coding downstream 35775 14181074 ~ 14181324 (+)
G2054772 NA non-coding downstream 51430 14196729 ~ 14196981 (+)
G2054773 NA non-coding downstream 52457 14197756 ~ 14197973 (+)
G2054803 NA non-coding downstream 91717 14237016 ~ 14237450 (+)
LOC110507618 LOC107659943 other upstream 569560 13554250 ~ 13575495 (+)
G2053443 NA other upstream 1166132 12978527 ~ 12978923 (+)
nudt8 LOC106580825 other upstream 1705577 12436060 ~ 12439501 (+)
G2051018 LOC106580809 other upstream 2007256 12127441 ~ 12137799 (+)
G2051034 NA other upstream 3151467 10992985 ~ 10993588 (+)
LOC110507180 LOC106612536 other downstream 680221 14825520 ~ 14841123 (+)
G2056256 NA other downstream 1451734 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 1924271 15776205 ~ 16131560 (+)
G2056820 NA other downstream 2228967 16374266 ~ 16376043 (+)
LOC110507087 LOC106612902 other downstream 2245722 16391021 ~ 16410705 (+)

Expression


Co-expression Network