G2055033


Basic Information

Item Value
gene id G2055033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 14342976 ~ 14344492 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2350334
TCACATATTACATTAATTTATTGATCTCAAAAGATGAAGATACATTCAATTTCTACAGCAACAGAGTTGAATTGTGTGCTTTATAATGCCGACGATTTAACACTAGAGTACCACTACGCAGATAAAACCTGACAAACCAGATTCACGTACAAATTAGACATTAAACCTTCTTTGTCTTTCTGAAAGTAGTAAAAATGAAATGATGGAGAGCAGTCTTTCTACCCCAAGGTGAAGCAGTTCAAGAATCTACAATATGTACACCTATCCAAAGTAAACAATTCTCAAAGAACATGAAGAACTACAGATAACTTACTTAAGAACGATAGATAACATGAAGAATGACAGATAACTTAAGCAGTAACAAAGTTACAATAGAAGTAGACAATGTTGGCCAATGTAAACGACAACTGTCATCTGGGTCCGTATTCACAAAGCATTTCAGATTAGGAGggctgatataggatcagttttGTATTTTAGATCATAATAAATATGATTACcaggatggggggggggggggggtctcatcctagatcagcactcctgccctgagatgctttgtgaatacaggctctGGGCAACTGTCAAGCGTAGTACTGCTCACCTATGTTGATCTCAGCAAAGCCAAACTGCAACGATGGCTGCTGCCTGACAGTCTCATCAAGATAGCTACTGTACATTAAAACATCACCTGGTGTCTTTTTGAGTTCGTTGGGTTGAGGGAATGGGGTACAGGGTTTTATTGGTGccttgtttgtgtttatgtgtaaTAAATACATAATTTATAAATTAACACATCGGATTGTGAAAACGTAATGTATAGGATATATAACAACGAAAGGAATACCAATTCTGCAGGCAAGAAATCTCAGATGGCTGATTTGTTTGCACTAAATAAATAAGGCCTACATCCCAAACTGATGCTGGGTTTTCCTTGTTTTCGTCTAACTAGGGACCGTACATCAGAAAATGAGAAACATGCTTATCTTATTAAAGGGAGACATGTCTGCTCACTGCACCCTAATGAAAGTCCTCAGTCCCATAGCCAGTCCTATAAGAGGGTGTGTAATATCACAGGTGTGATGAATTTTTAGCCTGAAAGTCTGACCTGTTTGTGCGTCAGCCAAATCTTTTAGCATTCCTTGTCATGGCTTACATCACAATTAATGAAAGAGGAATTGGCTAAAGCACAAACAAATCTGGCTACCAGGCTAGGGGTTTTTCATGATTCACACATGCGCTGAGAAACACTACGCTTGATGGTTGGGTTTGATGCATTGGGCGTACACAGTTGGAGACattagctggtgtgtgtgtgtgtgtttgtgtagatgGGGGGTGTTGGCAGAGCCTAGTGGGTCTCCAGTAGCCAGTCAAACAGGCTGGACAGAGAGCTGCCTCCGTCCTCCTCTTCCTGGTGGAGCTTACAGAACTGGATGACAGCGTTGAAGAGATCTCCGATCCTCCATGCCTTCTGAGACACCAGCTGCAACACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2350334 True 1496 lncRNA 0.41 2 14342976 14344492

Neighbor

gene id symbol gene type direction distance location
LOC118944762 LOC106580903 coding downstream 402409 13938651 ~ 13940567 (-)
zbtb38 LOC106580872 coding downstream 405200 13921993 ~ 13937776 (-)
rasa2 rasa2 coding downstream 425013 13870719 ~ 13917963 (-)
LOC110507078 shbgb coding downstream 481295 13858213 ~ 13861681 (-)
LOC110507619 LOC106580882 coding downstream 585151 13755242 ~ 13757825 (-)
LOC110507079 daw1 coding upstream 128 14344620 ~ 14354682 (-)
LOC118936442 NA coding upstream 10816 14355308 ~ 14366435 (-)
LOC110507166 LOC106580911 coding upstream 46807 14391271 ~ 14432847 (-)
LOC110507170 LOC106612565 coding upstream 90521 14435013 ~ 14436968 (-)
LOC110507173 LOC106580918 coding upstream 92908 14437400 ~ 14442421 (-)
G2055029 NA non-coding downstream 8737 14333068 ~ 14334239 (-)
G2055013 NA non-coding downstream 32760 14309672 ~ 14310216 (-)
G2054994 NA non-coding downstream 58969 14283709 ~ 14284007 (-)
G2054991 NA non-coding downstream 62947 14279769 ~ 14280029 (-)
G2054978 NA non-coding downstream 80794 14261972 ~ 14262182 (-)
G2055038 NA non-coding upstream 8778 14353270 ~ 14353557 (-)
G2055039 NA non-coding upstream 9394 14353886 ~ 14354150 (-)
G2055040 NA non-coding upstream 9933 14354425 ~ 14366408 (-)
G2055047 NA non-coding upstream 26593 14371085 ~ 14371324 (-)
G2055048 NA non-coding upstream 27909 14372401 ~ 14372619 (-)
LOC110507606 LOC106580867 other downstream 815541 13472445 ~ 13527504 (-)
G2054301 NA other downstream 870563 13456485 ~ 13472413 (-)
G2054307 LOC106612521 other downstream 938977 13401764 ~ 13403999 (-)
G2054116 NA other downstream 1344860 12997616 ~ 12998116 (-)
LOC110507082 LOC106580920 other upstream 188495 14532256 ~ 14719525 (-)
G2056115 NA other upstream 1031723 15376215 ~ 15376515 (-)
LOC110507646 LOC106612894 other upstream 2651068 16756597 ~ 17064214 (-)
LOC110507661 LOC106581010 other upstream 3120029 17464437 ~ 17481646 (-)
G2058724 NA other upstream 3577850 17922342 ~ 17922752 (-)

Expression


Co-expression Network