Gene
RNA
| Item | Value |
|---|---|
| gene id | G2055276 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 14857460 ~ 14857946 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2350617 | True | 487 | lncRNA | 0.51 | 1 | 14857460 | 14857946 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507171 | usf1 | coding | upstream | 4136 | 14848805 ~ 14853324 (+) |
| LOC110507180 | LOC106612536 | coding | upstream | 16337 | 14825520 ~ 14841123 (+) |
| LOC110507181 | LOC106580921 | coding | upstream | 81702 | 14743063 ~ 14775758 (+) |
| LOC110507158 | LOC106580945 | coding | upstream | 331260 | 14444379 ~ 14526200 (+) |
| LOC110507081 | LOC106612519 | coding | upstream | 485150 | 14371163 ~ 14372310 (+) |
| LOC110507163 | LOC106580923 | coding | downstream | 12164 | 14870110 ~ 14922494 (+) |
| LOC110507185 | NA | coding | downstream | 308956 | 15166902 ~ 15168856 (+) |
| il-18 | il-18 | coding | downstream | 325791 | 15183737 ~ 15187565 (+) |
| LOC118936438 | snx19 | coding | downstream | 351060 | 15209006 ~ 15242783 (+) |
| LOC110507084 | NA | coding | downstream | 384617 | 15242563 ~ 15244502 (+) |
| G2055273 | NA | non-coding | upstream | 36800 | 14818940 ~ 14820660 (+) |
| G2055272 | LOC106580921 | non-coding | upstream | 41176 | 14815238 ~ 14816284 (+) |
| G2055270 | LOC106580921 | non-coding | upstream | 42310 | 14796889 ~ 14815150 (+) |
| G2055240 | NA | non-coding | upstream | 224631 | 14632522 ~ 14632829 (+) |
| G2055102 | NA | non-coding | upstream | 387043 | 14470112 ~ 14470417 (+) |
| G2055361 | NA | non-coding | downstream | 80806 | 14938752 ~ 15090644 (+) |
| G2055369 | NA | non-coding | downstream | 186369 | 15044315 ~ 15047253 (+) |
| G2055432 | sorl1 | non-coding | downstream | 237128 | 15095074 ~ 15097092 (+) |
| G2055504 | NA | non-coding | downstream | 319496 | 15177442 ~ 15177682 (+) |
| LOC110507162 | LOC106580931 | non-coding | downstream | 513403 | 15359148 ~ 15372166 (+) |
| LOC110507618 | LOC107659943 | other | upstream | 1281965 | 13554250 ~ 13575495 (+) |
| G2053443 | NA | other | upstream | 1878537 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 2417982 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 2719661 | 12127441 ~ 12137799 (+) |
| G2056256 | NA | other | downstream | 739087 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 1211624 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 1516320 | 16374266 ~ 16376043 (+) |
| LOC110507087 | LOC106612902 | other | downstream | 1533075 | 16391021 ~ 16410705 (+) |
| G2057561 | NA | other | downstream | 2355164 | 17213110 ~ 17219017 (+) |
