G2055369


Basic Information

Item Value
gene id G2055369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 15044315 ~ 15047253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2350715
tttgcaaacCGAAACTTATTTATTCTGTACTACTATAACTAAGTATAGCAGAGATGCAATAACAACAGCTGCccctgtgaggtgtgtgtgtgagtgagtatgtgtgtgtgggtgtcgtTAACTGCTAGCGCACTGCAGTGTGGGCAACCCTGGGTAAAAAGCAGTCTCATCCATGTACCATGTGGCACATTTAGCTCACCCCTGAGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCATTCATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCATTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACTACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCAACACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTACATAGCTCACCACTGGGTCAGACATTCTCAGCACTAGCTTATTATCATAGCTCACCCCTGAGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGATCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCATTCATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCATTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCATTCATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGATCAGACATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCATTCATTCTCACCACTAGCTTATTAACATAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACGTAGCTCACCCCTGGGTCAGACATTCTCACCACTAGCTTATTAACATAGCT

Function

NR:

description
PREDICTED: dentin sialophosphoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2350715 True 1365 lncRNA 0.46 3 15044315 15047253

Neighbor

gene id symbol gene type direction distance location
LOC110507163 LOC106580923 coding upstream 121821 14870110 ~ 14922494 (+)
LOC110507171 usf1 coding upstream 190991 14848805 ~ 14853324 (+)
LOC110507180 LOC106612536 coding upstream 203192 14825520 ~ 14841123 (+)
LOC110507181 LOC106580921 coding upstream 268557 14743063 ~ 14775758 (+)
LOC110507158 LOC106580945 coding upstream 518115 14444379 ~ 14526200 (+)
LOC110507185 NA coding downstream 119649 15166902 ~ 15168856 (+)
il-18 il-18 coding downstream 136484 15183737 ~ 15187565 (+)
LOC118936438 snx19 coding downstream 161753 15209006 ~ 15242783 (+)
LOC110507084 NA coding downstream 195310 15242563 ~ 15244502 (+)
LOC110507162 LOC106580931 coding downstream 311895 15359148 ~ 15372166 (+)
G2055276 NA non-coding upstream 186369 14857460 ~ 14857946 (+)
G2055273 NA non-coding upstream 223655 14818940 ~ 14820660 (+)
G2055272 LOC106580921 non-coding upstream 228031 14815238 ~ 14816284 (+)
G2055270 LOC106580921 non-coding upstream 229165 14796889 ~ 14815150 (+)
G2055240 NA non-coding upstream 411486 14632522 ~ 14632829 (+)
G2055432 sorl1 non-coding downstream 47821 15095074 ~ 15097092 (+)
G2055504 NA non-coding downstream 130189 15177442 ~ 15177682 (+)
G2055632 NA non-coding downstream 327484 15374737 ~ 15375012 (+)
LOC110507164 LOC106580932 non-coding downstream 357362 15380417 ~ 15405079 (+)
LOC110507618 LOC107659943 other upstream 1468820 13554250 ~ 13575495 (+)
G2053443 NA other upstream 2065392 12978527 ~ 12978923 (+)
nudt8 LOC106580825 other upstream 2604837 12436060 ~ 12439501 (+)
G2051018 LOC106580809 other upstream 2906516 12127441 ~ 12137799 (+)
G2056256 NA other downstream 549780 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 1022317 15776205 ~ 16131560 (+)
G2056820 NA other downstream 1327013 16374266 ~ 16376043 (+)
LOC110507087 LOC106612902 other downstream 1343768 16391021 ~ 16410705 (+)
G2057561 NA other downstream 2165857 17213110 ~ 17219017 (+)

Expression


Co-expression Network