G2055632


Basic Information

Item Value
gene id G2055632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 15374737 ~ 15375012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2351009
aactagcctctcaaagcacttcatgatcaCAGAAGttagtgctatggggcgatagtcattagttcagttacctttgttcCTGTACACAAGAAAGCAATGGTTGACATCTTGAAGCAAATGGGGACAGCAGACTAGGAtaaggagagattgaatatgtctgtaaacactccagccagctggtctgccatGCTCTGAGGCCGTCTGGACCGGCAGCCTTGCGATGGTTAACTTGATTAAATGTCTTACCCACGacggccacggagaacgagagccagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2351009 True 276 lncRNA 0.48 1 15374737 15375012

Neighbor

gene id symbol gene type direction distance location
LOC110507162 LOC106580931 coding upstream 2571 15359148 ~ 15372166 (+)
LOC110507084 NA coding upstream 130235 15242563 ~ 15244502 (+)
LOC118936438 snx19 coding upstream 131954 15209006 ~ 15242783 (+)
il-18 il-18 coding upstream 187172 15183737 ~ 15187565 (+)
LOC110507185 NA coding upstream 205881 15166902 ~ 15168856 (+)
LOC110507164 LOC106580932 coding downstream 5405 15380417 ~ 15405079 (+)
LOC110507174 LOC106580954 coding downstream 79254 15454266 ~ 15470216 (+)
LOC110507176 LOC106580933 coding downstream 108063 15483075 ~ 15487764 (+)
LOC110507160 LOC106580937 coding downstream 197370 15572382 ~ 15604161 (+)
LOC110507625 LOC106580941 coding downstream 369993 15745005 ~ 15768122 (+)
G2055504 NA non-coding upstream 197055 15177442 ~ 15177682 (+)
G2055432 sorl1 non-coding upstream 277645 15095074 ~ 15097092 (+)
G2055361 NA non-coding upstream 284093 14938752 ~ 15090644 (+)
G2055369 NA non-coding upstream 327484 15044315 ~ 15047253 (+)
G2055656 NA non-coding downstream 53030 15428042 ~ 15428314 (+)
G2056167 NA non-coding downstream 66337 15441349 ~ 15441568 (+)
G2056191 NA non-coding downstream 97579 15472591 ~ 15475846 (+)
G2056212 NA non-coding downstream 132130 15507142 ~ 15507763 (+)
LOC110507180 LOC106612536 other upstream 541149 14825520 ~ 14841123 (+)
LOC110507618 LOC107659943 other upstream 1799242 13554250 ~ 13575495 (+)
G2053443 NA other upstream 2395814 12978527 ~ 12978923 (+)
nudt8 LOC106580825 other upstream 2935259 12436060 ~ 12439501 (+)
G2051018 LOC106580809 other upstream 3236938 12127441 ~ 12137799 (+)
G2056256 NA other downstream 222021 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 694558 15776205 ~ 16131560 (+)
G2056820 NA other downstream 999254 16374266 ~ 16376043 (+)
LOC110507087 LOC106612902 other downstream 1016009 16391021 ~ 16410705 (+)
G2057561 NA other downstream 1838098 17213110 ~ 17219017 (+)

Expression


Co-expression Network