G2056341


Basic Information

Item Value
gene id G2056341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 15573740 ~ 15576018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2351795
AAACTCTCAGTGTTGCTTGATTGTCCAGAATAGTTATTATTTGGGGAAGATGGACTTTCACCTCATATTTGGGCAACACTGTAAAAGATACATGTTGATATTACGTCTTCAATGTCTGTTGAACTACACCAAAAACAAAATCACAGACCACAATTTAATCACAATGTAAAAACAATAGAATCAGACAGAAGACATCACCATATTCTTTGATGTCAAAGTTTTGGGAGGTTTGTTCTCCCTTCTCATTCCATGCAGTGATGATGTAACTTCCTTGCTTTGCCTCTGCGGACATGGGGTGGGACAGGTCCAGAATTCCACTCACTGTTGACTGGTTCAACCACTGAGCAATGCGGTTGGAGTTGGGGTCCTGAAGTTCCACTGTTTCATACATCTGATTGAATGACAAGAAACTAGCATCCAGCGAGACGATTCGGAACTTGActgtctgtccaggtttGTAGACTGGTTTGTCTGTCTGGAAAATGGTGAGGAATCTTTTGGGCTTGATCAAGATCTTGGTCTTTTTACTCATCTCATCCTTCCTCCCCTTGATGCTAACATGTACAGTGGCCACACTGTCAGTCTTCACTGTAGGTACCTGTACAACATGAAGAACAGGACAATGGATGTTTCTCTAGCTCCTAACCATAGCTTGGCTCTCCTAACAGTAGTTTGAGAAGAGCGCTTTTTGTTAAAATGGTGGATAGTCATACTTCGCTATGCTGAGGTTAAAATAACAGCCATTACATGTCATAGGTTGGATCATTTTGCATAAAGCCTGGAAACCAAGTTGAGTTCCACACAACATGACTGAATTACATCCAAACTATTCAGAATAAAAGACTGGCATGAATGTGTGTTGCTGAATGAATGCGTATAGTTAAGgacaccttctctttccatgacagactgaccaggtgaatccaggtgaaagctatgatcccttattcatgtcacttgttaaacccacttcaatcagtgtagatgaaggggaggagacaggttaaagaatcatttttaagccttgagacatggattgtgtctgtgtgccattcagagggataattggcaagacaaaatattgaattgcctttgaactgggtatggtaggtgccaggtgcaccagtttgtataaagaactgcaacactgctgggtttttcacactcaacagtttctcgcgtgtatcaagaattgtccaccacccaaaggacgtcAAGCCAACTCGGGCCAGCATCTATGTAGAACGCTTTCGACAACTGTTGAGTCCATGGcacgacaaattgaggctgttctaagggcaaaactcaatattaggaaggtgttcttaatgtttggtatactcagtgtatgtacaATTTGTGGGGGTTACTGTTCAACTAAAATCAATATGAAGCGAGGAACAGGTTGTGTAACACCCAACACTGACGGGAAAGAGACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2351795 True 1439 lncRNA 0.42 4 15573740 15576018

Neighbor

gene id symbol gene type direction distance location
LOC110507169 LOC106580935 coding downstream 15195 15553670 ~ 15558545 (-)
LOC110507175 NA coding downstream 51211 15502712 ~ 15522529 (-)
LOC118944779 NA coding downstream 86895 15482577 ~ 15486845 (-)
LOC110507161 LOC106580930 coding downstream 215365 15326868 ~ 15358375 (-)
LOC110507168 LOC106612549 coding downstream 370966 15198498 ~ 15202774 (-)
LOC110507155 LOC106580939 coding upstream 28151 15604169 ~ 15714610 (-)
LOC110507085 LOC106580950 coding upstream 192357 15768375 ~ 15769382 (-)
si:dkeyp-97b10.3 LOC106580916 coding upstream 565707 16141725 ~ 16164147 (-)
ift80 ift80 coding upstream 617227 16193245 ~ 16260045 (-)
trim59 LOC106580965 coding upstream 707681 16283699 ~ 16289035 (-)
G2056385 NA non-coding downstream 21130 15552407 ~ 15552610 (-)
G2056370 NA non-coding downstream 42088 15531362 ~ 15531652 (-)
G2056359 NA non-coding downstream 66133 15507279 ~ 15507607 (-)
G2056149 NA non-coding downstream 145432 15427897 ~ 15428308 (-)
G2056492 NA non-coding upstream 195494 15771512 ~ 15771783 (-)
G2056835 NA non-coding upstream 204992 15781010 ~ 15781209 (-)
G2056841 NA non-coding upstream 217295 15793313 ~ 15793990 (-)
G2056847 NA non-coding upstream 230404 15806422 ~ 15806644 (-)
G2056115 NA other downstream 197225 15376215 ~ 15376515 (-)
LOC110507082 LOC106580920 other downstream 1038500 14532256 ~ 14719525 (-)
LOC110507619 LOC106580882 other downstream 1816043 13755242 ~ 13757825 (-)
LOC110507606 LOC106580867 other downstream 2046305 13472445 ~ 13527504 (-)
G2054301 NA other downstream 2101327 13456485 ~ 13472413 (-)
LOC110507646 LOC106612894 other upstream 1419542 16756597 ~ 17064214 (-)
LOC110507661 LOC106581010 other upstream 1888503 17464437 ~ 17481646 (-)
G2058724 NA other upstream 2346324 17922342 ~ 17922752 (-)
LOC110507754 LOC106581192 other upstream 5338096 20913520 ~ 20924130 (-)
LOC110507765 dynll2a other upstream 5694149 21270167 ~ 21273576 (-)

Expression


Co-expression Network