Gene
RNA
| Item | Value |
|---|---|
| gene id | G2056460 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 15743600 ~ 15744104 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger BED domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2351919 | True | 505 | lncRNA | 0.43 | 1 | 15743600 | 15744104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507160 | LOC106580937 | coding | upstream | 139439 | 15572382 ~ 15604161 (+) |
| LOC110507176 | LOC106580933 | coding | upstream | 255836 | 15483075 ~ 15487764 (+) |
| LOC110507174 | LOC106580954 | coding | upstream | 273384 | 15454266 ~ 15470216 (+) |
| LOC110507164 | LOC106580932 | coding | upstream | 338656 | 15380417 ~ 15405079 (+) |
| LOC110507162 | LOC106580931 | coding | upstream | 371434 | 15359148 ~ 15372166 (+) |
| LOC110507625 | LOC106580941 | coding | downstream | 901 | 15745005 ~ 15768122 (+) |
| LOC110507626 | LOC106612913 | coding | downstream | 32101 | 15776205 ~ 16131560 (+) |
| LOC110507263 | LOC106580951 | coding | downstream | 389463 | 16133567 ~ 16135743 (+) |
| smc4 | LOC106580963 | coding | downstream | 516065 | 16260169 ~ 16281392 (+) |
| trnaa-ugc-189 | NA | coding | downstream | 580214 | 16324318 ~ 16324393 (+) |
| G2056458 | NA | non-coding | upstream | 897 | 15742405 ~ 15742703 (+) |
| G2056200 | NA | non-coding | upstream | 178241 | 15564269 ~ 15565359 (+) |
| G2056232 | NA | non-coding | upstream | 201710 | 15541661 ~ 15541890 (+) |
| G2056230 | NA | non-coding | upstream | 203445 | 15539857 ~ 15540155 (+) |
| G2056223 | NA | non-coding | upstream | 214413 | 15528823 ~ 15529187 (+) |
| G2056510 | NA | non-coding | downstream | 48363 | 15792467 ~ 15793101 (+) |
| G2056516 | NA | non-coding | downstream | 70409 | 15814513 ~ 15814725 (+) |
| G2056535 | NA | non-coding | downstream | 107569 | 15851673 ~ 15851883 (+) |
| G2056546 | NA | non-coding | downstream | 136430 | 15880534 ~ 15880968 (+) |
| G2056256 | NA | other | upstream | 145949 | 15597033 ~ 15597651 (+) |
| LOC110507180 | LOC106612536 | other | upstream | 910012 | 14825520 ~ 14841123 (+) |
| LOC110507618 | LOC107659943 | other | upstream | 2168105 | 13554250 ~ 13575495 (+) |
| G2053443 | NA | other | upstream | 2764677 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 3304122 | 12436060 ~ 12439501 (+) |
| G2056820 | NA | other | downstream | 630162 | 16374266 ~ 16376043 (+) |
| LOC110507087 | LOC106612902 | other | downstream | 646917 | 16391021 ~ 16410705 (+) |
| G2057561 | NA | other | downstream | 1469006 | 17213110 ~ 17219017 (+) |
| G2057788 | NA | other | downstream | 1811400 | 17555504 ~ 17566384 (+) |
