G2056841


Basic Information

Item Value
gene id G2056841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 15793313 ~ 15793990 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2352330
gtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaaattatactgttacattgatgctgttgacccggattactggttgctgcggaaaaaaaaaaggaggaaggtcaaaaggggggtgagtgtaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcg
>TU2352331
gtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaaattatactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaggtcaaaaggggggtgagtgtaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcg
>TU2352333
gtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaaattatactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaggtcaaaaggggggtgagtgtaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2352330 False 373 lncRNA 0.52 2 15793313 15793990
TU2352331 False 368 lncRNA 0.53 2 15793313 15793990
TU2352333 True 368 lncRNA 0.53 2 15793313 15793990

Neighbor

gene id symbol gene type direction distance location
LOC110507085 LOC106580950 coding downstream 23931 15768375 ~ 15769382 (-)
LOC110507155 LOC106580939 coding downstream 78703 15604169 ~ 15714610 (-)
LOC110507169 LOC106580935 coding downstream 234768 15553670 ~ 15558545 (-)
LOC110507175 NA coding downstream 270784 15502712 ~ 15522529 (-)
LOC118944779 NA coding downstream 306468 15482577 ~ 15486845 (-)
si:dkeyp-97b10.3 LOC106580916 coding upstream 347735 16141725 ~ 16164147 (-)
ift80 ift80 coding upstream 399255 16193245 ~ 16260045 (-)
trim59 LOC106580965 coding upstream 489709 16283699 ~ 16289035 (-)
LOC110507632 LOC106580964 coding upstream 495442 16289432 ~ 16303061 (-)
LOC110507633 LOC106580971 coding upstream 510096 16304086 ~ 16305367 (-)
G2056835 NA non-coding downstream 12104 15781010 ~ 15781209 (-)
G2056492 NA non-coding downstream 21530 15771512 ~ 15771783 (-)
G2056341 NA non-coding downstream 217295 15573740 ~ 15576018 (-)
G2056385 NA non-coding downstream 240703 15552407 ~ 15552610 (-)
G2056847 NA non-coding upstream 12432 15806422 ~ 15806644 (-)
G2056858 NA non-coding upstream 26208 15820198 ~ 15820410 (-)
G2056861 NA non-coding upstream 40853 15834843 ~ 15835058 (-)
G2056866 NA non-coding upstream 45257 15839247 ~ 15839527 (-)
G2056885 NA non-coding upstream 75679 15869669 ~ 15869936 (-)
G2056115 NA other downstream 416798 15376215 ~ 15376515 (-)
LOC110507082 LOC106580920 other downstream 1258073 14532256 ~ 14719525 (-)
LOC110507619 LOC106580882 other downstream 2035616 13755242 ~ 13757825 (-)
LOC110507606 LOC106580867 other downstream 2265878 13472445 ~ 13527504 (-)
G2054301 NA other downstream 2320900 13456485 ~ 13472413 (-)
LOC110507646 LOC106612894 other upstream 1201570 16756597 ~ 17064214 (-)
LOC110507661 LOC106581010 other upstream 1670531 17464437 ~ 17481646 (-)
G2058724 NA other upstream 2128352 17922342 ~ 17922752 (-)
LOC110507754 LOC106581192 other upstream 5120124 20913520 ~ 20924130 (-)
LOC110507765 dynll2a other upstream 5476177 21270167 ~ 21273576 (-)

Expression


Co-expression Network