Gene
RNA
| Item | Value |
|---|---|
| gene id | G2056549 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 15886258 ~ 15886496 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2352015 | True | 239 | lncRNA | 0.41 | 1 | 15886258 | 15886496 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507625 | LOC106580941 | coding | upstream | 118136 | 15745005 ~ 15768122 (+) |
| LOC110507160 | LOC106580937 | coding | upstream | 282097 | 15572382 ~ 15604161 (+) |
| LOC110507176 | LOC106580933 | coding | upstream | 398494 | 15483075 ~ 15487764 (+) |
| LOC110507174 | LOC106580954 | coding | upstream | 416042 | 15454266 ~ 15470216 (+) |
| LOC110507164 | LOC106580932 | coding | upstream | 481314 | 15380417 ~ 15405079 (+) |
| LOC110507263 | LOC106580951 | coding | downstream | 247071 | 16133567 ~ 16135743 (+) |
| smc4 | LOC106580963 | coding | downstream | 373673 | 16260169 ~ 16281392 (+) |
| trnaa-ugc-189 | NA | coding | downstream | 437822 | 16324318 ~ 16324393 (+) |
| LOC110507634 | nmd3 | coding | downstream | 468507 | 16355003 ~ 16368356 (+) |
| LOC110507086 | LOC106580960 | coding | downstream | 494799 | 16381295 ~ 16390983 (+) |
| G2056546 | NA | non-coding | upstream | 5290 | 15880534 ~ 15880968 (+) |
| G2056535 | NA | non-coding | upstream | 34375 | 15851673 ~ 15851883 (+) |
| G2056516 | NA | non-coding | upstream | 71533 | 15814513 ~ 15814725 (+) |
| G2056510 | NA | non-coding | upstream | 93157 | 15792467 ~ 15793101 (+) |
| G2056558 | NA | non-coding | downstream | 18353 | 15904849 ~ 15905260 (+) |
| G2056560 | NA | non-coding | downstream | 21568 | 15908064 ~ 15908377 (+) |
| G2056562 | NA | non-coding | downstream | 23015 | 15909511 ~ 15910128 (+) |
| G2056572 | NA | non-coding | downstream | 36699 | 15923195 ~ 15923422 (+) |
| G2056654 | NA | non-coding | downstream | 209306 | 16095802 ~ 16096087 (+) |
| G2056256 | NA | other | upstream | 288607 | 15597033 ~ 15597651 (+) |
| LOC110507180 | LOC106612536 | other | upstream | 1052670 | 14825520 ~ 14841123 (+) |
| LOC110507618 | LOC107659943 | other | upstream | 2310763 | 13554250 ~ 13575495 (+) |
| G2053443 | NA | other | upstream | 2907335 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 3446780 | 12436060 ~ 12439501 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 183074 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 487770 | 16374266 ~ 16376043 (+) |
| LOC110507087 | LOC106612902 | other | downstream | 504525 | 16391021 ~ 16410705 (+) |
| G2057561 | NA | other | downstream | 1326614 | 17213110 ~ 17219017 (+) |
| G2057788 | NA | other | downstream | 1669008 | 17555504 ~ 17566384 (+) |
