G2057174


Basic Information

Item Value
gene id G2057174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 16442577 ~ 16468248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2352726
agtttcaactgttctgccttattattattggaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaacttgcttcaacacctgcattgctagctgtttgggattttaggccgggtttctgtacagcacttgtacaaatttgatttgatttgatttggtatggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2352726 True 287 lncRNA 0.44 2 16442577 16468248

Neighbor

gene id symbol gene type direction distance location
LOC110507087 LOC106612902 coding upstream 31872 16391021 ~ 16410705 (+)
LOC110507086 LOC106580960 coding upstream 51594 16381295 ~ 16390983 (+)
LOC110507634 nmd3 coding upstream 74221 16355003 ~ 16368356 (+)
trnaa-ugc-189 NA coding upstream 118184 16324318 ~ 16324393 (+)
smc4 LOC106580963 coding upstream 161185 16260169 ~ 16281392 (+)
LOC110507095 LOC106580905 coding downstream 48153 16516401 ~ 16518130 (+)
LOC110507096 LOC106580969 coding downstream 73613 16541861 ~ 16555306 (+)
LOC118944639 LOC106580969 coding downstream 123833 16592081 ~ 16597381 (+)
LOC118944640 LOC106580982 coding downstream 129970 16598218 ~ 16607095 (+)
LOC110507099 NA coding downstream 142168 16610416 ~ 16611157 (+)
G2056801 NA non-coding upstream 120713 16321206 ~ 16321864 (+)
G2056789 NA non-coding upstream 138540 16303455 ~ 16304037 (+)
G2056770 NA non-coding upstream 150982 16289436 ~ 16291595 (+)
G2057302 LOC106612898 non-coding downstream 202830 16671078 ~ 16677588 (+)
G2057304 NA non-coding downstream 221336 16689584 ~ 16690727 (+)
G2057315 NA non-coding downstream 245483 16713731 ~ 16714184 (+)
G2057416 NA non-coding downstream 428151 16896399 ~ 16900472 (+)
G2057476 NA non-coding downstream 527312 16995560 ~ 17001137 (+)
G2056820 NA other upstream 66534 16374266 ~ 16376043 (+)
LOC110507626 LOC106612913 other upstream 365238 15776205 ~ 16131560 (+)
G2056256 NA other upstream 844926 15597033 ~ 15597651 (+)
LOC110507180 LOC106612536 other upstream 1608989 14825520 ~ 14841123 (+)
G2057561 NA other downstream 744862 17213110 ~ 17219017 (+)
G2057788 NA other downstream 1087256 17555504 ~ 17566384 (+)
G2057804 NA other downstream 1115722 17583970 ~ 17585924 (+)
G2057945 NA other downstream 1405553 17873801 ~ 17875832 (+)
G2059435 NA other downstream 2102851 18571099 ~ 18594842 (+)

Expression


Co-expression Network