G2057304


Basic Information

Item Value
gene id G2057304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 16689584 ~ 16690727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2352871
catttaggtaggttactttagtgttcttgggcacagggactatggtggtctgcttgaaacatgttggtattacagacagggagaggttgaaaatgtcagtgaagacacttgccagttggtcagcgcatgctcagagtacacgtcctggtaacacatctggccctgcggccttgtgaatgttgaccatATAGACACACccctgacctgtttaaaggtcttactcacatcggctgcggagagcgtgatcacacagtcgtccgggaacagctggtgctctcatgcatgtttcagtgttacttgcctagaagttatttagcttgtctggtaggctcgtgtcaatgggcagctcttggctgtgcttcccttttgtagtctgtaatagtttgcaagccctaccacatccgactggcgtcggagccggtgtagtacgactcgatcttagtcttgtattgatgctttgcctgtttgatggtccgtcagagggcatagcgggatttcttataagcttccggattagagtcccgctccttgaaagcggcagctctagcctttagctcagtgcgaatgttgcctgtaatccatggcttctggttggggtatgtatgtacagtcgtCCAAATAAGCCCAAGAAGTGAGGAATTTTTGTATTGAGGTCAATGAGTTTttaatttggtcaacaaaaaaatggAATTGCTCATTTGctacgtgaggcttatttgattgtAAGTCATTTTTGTAATGTTTAAGTTGTTACGAATGCAGTGATAAGTGGACGCCTGTGGCATATCGGCAACTTACCCAAAAATGACTATATTGTAGTTGTCCCTGTTGtcatagagatatatagaggactcatcatggatttaatccattttagcatggacattgccatttgAAGGCTTCCAACAtgttaaagtagtcaactgggtggggattcctatgagttgggagAAAAAAATCAGTCAATGAAGAAACATATTGTACTACTTTATAAAGGAGATTGCCATTGAGGCAATGTCTATTGCTGTCAgatgctataatggcacagaaacaaagatgagtcctctatatatctctatggGCTATTATTCACACGTATCTGCGCTCTTGGTTAGAATAGTCCCACCtaccttccatctttgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2352871 True 1144 lncRNA 0.44 1 16689584 16690727

Neighbor

gene id symbol gene type direction distance location
LOC110507104 ints4 coding upstream 1164 16677716 ~ 16688420 (+)
LOC110507103 LOC106580982 coding upstream 30882 16657763 ~ 16658702 (+)
LOC110507098 LOC106580982 coding upstream 36108 16652538 ~ 16653476 (+)
LOC110507100 LOC106580955 coding upstream 62232 16622542 ~ 16627352 (+)
LOC110507099 NA coding upstream 78427 16610416 ~ 16611157 (+)
LOC110507643 LOC106580974 coding downstream 15081 16705808 ~ 16721477 (+)
LOC110507645 LOC106580976 coding downstream 35518 16726245 ~ 16747680 (+)
LOC110507649 mb211 coding downstream 175734 16866461 ~ 16868814 (+)
trnag-ucc-232 NA coding downstream 516109 17206836 ~ 17206907 (+)
LOC110507653 LOC106580984 coding downstream 528761 17219488 ~ 17227085 (+)
G2057302 LOC106612898 non-coding upstream 11996 16671078 ~ 16677588 (+)
G2057174 NA non-coding upstream 221336 16442577 ~ 16468248 (+)
LOC110507087 LOC106612902 non-coding upstream 295238 16391021 ~ 16410705 (+)
LOC110507086 LOC106580960 non-coding upstream 298652 16381295 ~ 16390983 (+)
G2056801 NA non-coding upstream 367720 16321206 ~ 16321864 (+)
G2057315 NA non-coding downstream 23004 16713731 ~ 16714184 (+)
G2057416 NA non-coding downstream 205672 16896399 ~ 16900472 (+)
G2057476 NA non-coding downstream 304833 16995560 ~ 17001137 (+)
G2057495 NA non-coding downstream 353246 17043973 ~ 17075854 (+)
G2057494 NA non-coding downstream 379163 17069890 ~ 17072680 (+)
G2056820 NA other upstream 313541 16374266 ~ 16376043 (+)
LOC110507626 LOC106612913 other upstream 612245 15776205 ~ 16131560 (+)
G2056256 NA other upstream 1091933 15597033 ~ 15597651 (+)
LOC110507180 LOC106612536 other upstream 1855996 14825520 ~ 14841123 (+)
G2057561 NA other downstream 522383 17213110 ~ 17219017 (+)
G2057788 NA other downstream 864777 17555504 ~ 17566384 (+)
G2057804 NA other downstream 893243 17583970 ~ 17585924 (+)
G2057945 NA other downstream 1183074 17873801 ~ 17875832 (+)
G2059435 NA other downstream 1880372 18571099 ~ 18594842 (+)

Expression


Co-expression Network