G2057554


Basic Information

Item Value
gene id G2057554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17130524 ~ 17130985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2353173
gggccaaaatccctgctgcattgtgtgcaaacctggtcaagaactacaggaaacgtatgatctctgtaattgcaaacaaaggtttctgtaccaaatattaagttctgcttttctgatgtatcaaatacttatgtcatgcaataaaatgcaaattaattacttaatcatacaatgtgattttctggatttttgttttagattccgtctctcacagttgaagtgtacctatgataaaaaattacagacctctacatgctttgtaagtaggaaatcctgcaaaatcggcagtgtatcaaatacttgttctccccactgtatgcacgcacgcacggacactcacacagataaagagaaagagatggaagaggaaagGGGGTGGATTGATAATGTTTTGTGAAGGATagattacatacagtaccagacaaaactttggacacacctactgattcaagggtttttctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2353173 True 462 lncRNA 0.37 1 17130524 17130985

Neighbor

gene id symbol gene type direction distance location
LOC110507649 mb211 coding upstream 261710 16866461 ~ 16868814 (+)
LOC110507645 LOC106580976 coding upstream 382844 16726245 ~ 16747680 (+)
LOC110507643 LOC106580974 coding upstream 409047 16705808 ~ 16721477 (+)
LOC110507104 ints4 coding upstream 442104 16677716 ~ 16688420 (+)
LOC110507103 LOC106580982 coding upstream 471822 16657763 ~ 16658702 (+)
trnag-ucc-232 NA coding downstream 75851 17206836 ~ 17206907 (+)
LOC110507653 LOC106580984 coding downstream 88503 17219488 ~ 17227085 (+)
LOC110507657 LOC106581017 coding downstream 116321 17247306 ~ 17260399 (+)
dcnl4 dcnl5 coding downstream 135204 17266189 ~ 17287155 (+)
LOC110507110 LOC106581014 coding downstream 162337 17293322 ~ 17321281 (+)
G2057553 NA non-coding upstream 122 17130123 ~ 17130402 (+)
G2057533 NA non-coding upstream 34639 17093260 ~ 17095885 (+)
G2057495 NA non-coding upstream 54670 17043973 ~ 17075854 (+)
G2057494 NA non-coding upstream 57844 17069890 ~ 17072680 (+)
G2057476 NA non-coding upstream 129387 16995560 ~ 17001137 (+)
G2057572 NA non-coding downstream 15106 17146091 ~ 17146426 (+)
G2057561 NA non-coding downstream 82125 17213110 ~ 17219017 (+)
G2057638 NA non-coding downstream 150240 17281225 ~ 17281967 (+)
G2057657 NA non-coding downstream 170414 17301399 ~ 17301807 (+)
LOC110507087 LOC106612902 other upstream 720155 16391021 ~ 16410705 (+)
G2056820 NA other upstream 754481 16374266 ~ 16376043 (+)
LOC110507626 LOC106612913 other upstream 1053185 15776205 ~ 16131560 (+)
G2056256 NA other upstream 1532873 15597033 ~ 15597651 (+)
LOC110507180 LOC106612536 other upstream 2296936 14825520 ~ 14841123 (+)
G2057788 NA other downstream 424519 17555504 ~ 17566384 (+)
G2057804 NA other downstream 452985 17583970 ~ 17585924 (+)
G2057945 NA other downstream 742816 17873801 ~ 17875832 (+)
G2059435 NA other downstream 1440114 18571099 ~ 18594842 (+)

Expression


Co-expression Network