Gene
RNA
| Item | Value |
|---|---|
| gene id | G2057640 |
| gene name | LOC106612879 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 17414467 ~ 17462829 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| methylosome subunit pICln-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2353278 | True | 773 | lncRNA | 0.51 | 3 | 17414467 | 17462829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507111 | LOC106581013 | coding | upstream | 36134 | 17321743 ~ 17379119 (+) |
| LOC110507110 | LOC106581014 | coding | upstream | 93186 | 17293322 ~ 17321281 (+) |
| dcnl4 | dcnl5 | coding | upstream | 127312 | 17266189 ~ 17287155 (+) |
| LOC110507657 | LOC106581017 | coding | upstream | 154068 | 17247306 ~ 17260399 (+) |
| LOC110507653 | LOC106580984 | coding | upstream | 187382 | 17219488 ~ 17227085 (+) |
| si:dkey-56d12.4 | NA | coding | downstream | 18872 | 17481701 ~ 17484129 (+) |
| LOC110507114 | LOC106581006 | coding | downstream | 207625 | 17670454 ~ 17780391 (+) |
| LOC110507666 | LOC106581002 | coding | downstream | 323446 | 17786275 ~ 17814495 (+) |
| brip1 | brip1 | coding | downstream | 737967 | 18200796 ~ 18243226 (+) |
| LOC118944759 | NA | coding | downstream | 906434 | 18369263 ~ 18378985 (+) |
| G2057688 | LOC106580992 | non-coding | upstream | 29767 | 17383487 ~ 17384700 (+) |
| G2057641 | NA | non-coding | upstream | 34006 | 17379607 ~ 17380461 (+) |
| G2057657 | NA | non-coding | upstream | 112660 | 17301399 ~ 17301807 (+) |
| G2057771 | NA | non-coding | downstream | 65480 | 17528309 ~ 17528602 (+) |
| G2057783 | NA | non-coding | downstream | 84438 | 17547267 ~ 17547900 (+) |
| G2057784 | NA | non-coding | downstream | 85776 | 17548605 ~ 17548847 (+) |
| G2057743 | LOC106581008 | non-coding | downstream | 87960 | 17550789 ~ 17551511 (+) |
| G2057561 | NA | other | upstream | 197924 | 17213110 ~ 17219017 (+) |
| LOC110507087 | LOC106612902 | other | upstream | 1004098 | 16391021 ~ 16410705 (+) |
| G2056820 | NA | other | upstream | 1038424 | 16374266 ~ 16376043 (+) |
| LOC110507626 | LOC106612913 | other | upstream | 1337128 | 15776205 ~ 16131560 (+) |
| G2056256 | NA | other | upstream | 1816816 | 15597033 ~ 15597651 (+) |
| G2057788 | NA | other | downstream | 92675 | 17555504 ~ 17566384 (+) |
| G2057804 | NA | other | downstream | 121141 | 17583970 ~ 17585924 (+) |
| G2057945 | NA | other | downstream | 410972 | 17873801 ~ 17875832 (+) |
| G2059435 | NA | other | downstream | 1108270 | 18571099 ~ 18594842 (+) |
| G2059714 | NA | other | downstream | 1629118 | 19091947 ~ 19092272 (+) |
