G2057771


Basic Information

Item Value
gene id G2057771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17528309 ~ 17528602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2353422
aatcagactattggttgcatcttacgcagtctttcttttcgcaaccctgcgtcttggtcagaacagctcccctgggcagaatacgcccacaactcgcttccttcgtctgcgaccgggctatctccttttcagagtagcctcgggtaccagcctccgctgttctcatctcagttcgccgagtccagcgtcccctccgctcaggcttttgtccaacgttgcgagcgcacctggaagagggtcaggtctgcactttgccgttatagggcgcagactgtgagggctgctaataagcgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2353422 True 294 lncRNA 0.56 1 17528309 17528602

Neighbor

gene id symbol gene type direction distance location
si:dkey-56d12.4 NA coding upstream 44180 17481701 ~ 17484129 (+)
LOC110507111 LOC106581013 coding upstream 149976 17321743 ~ 17379119 (+)
LOC110507110 LOC106581014 coding upstream 207028 17293322 ~ 17321281 (+)
dcnl4 dcnl5 coding upstream 241154 17266189 ~ 17287155 (+)
LOC110507657 LOC106581017 coding upstream 267910 17247306 ~ 17260399 (+)
LOC110507114 LOC106581006 coding downstream 141852 17670454 ~ 17780391 (+)
LOC110507666 LOC106581002 coding downstream 257673 17786275 ~ 17814495 (+)
brip1 brip1 coding downstream 672194 18200796 ~ 18243226 (+)
LOC118944759 NA coding downstream 840661 18369263 ~ 18378985 (+)
LOC110507678 LOC106612861 coding downstream 1218593 18747195 ~ 18770034 (+)
G2057640 LOC106612879 non-coding upstream 65480 17414467 ~ 17462829 (+)
G2057644 LOC106581011 non-coding upstream 66550 17455975 ~ 17461759 (+)
G2057706 NA non-coding upstream 112538 17414992 ~ 17415771 (+)
G2057688 LOC106580992 non-coding upstream 143609 17383487 ~ 17384700 (+)
G2057783 NA non-coding downstream 18665 17547267 ~ 17547900 (+)
G2057784 NA non-coding downstream 20003 17548605 ~ 17548847 (+)
G2057743 LOC106581008 non-coding downstream 22187 17550789 ~ 17551511 (+)
G2057788 NA non-coding downstream 26902 17555504 ~ 17566384 (+)
G2057810 NA non-coding downstream 77460 17606062 ~ 17609718 (+)
G2057561 NA other upstream 311766 17213110 ~ 17219017 (+)
LOC110507087 LOC106612902 other upstream 1117940 16391021 ~ 16410705 (+)
G2056820 NA other upstream 1152266 16374266 ~ 16376043 (+)
LOC110507626 LOC106612913 other upstream 1450970 15776205 ~ 16131560 (+)
G2056256 NA other upstream 1930658 15597033 ~ 15597651 (+)
G2057804 NA other downstream 55368 17583970 ~ 17585924 (+)
G2057945 NA other downstream 345199 17873801 ~ 17875832 (+)
G2059435 NA other downstream 1042497 18571099 ~ 18594842 (+)
G2059714 NA other downstream 1563345 19091947 ~ 19092272 (+)

Expression


Co-expression Network