Gene
RNA
| Item | Value |
|---|---|
| gene id | G2057813 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 17607487 ~ 17610380 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2353485 | False | 373 | lncRNA | 0.35 | 2 | 17607487 | 17610380 |
| TU2353486 | True | 401 | lncRNA | 0.36 | 2 | 17607487 | 17610380 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-56d12.4 | NA | coding | upstream | 123358 | 17481701 ~ 17484129 (+) |
| LOC110507111 | LOC106581013 | coding | upstream | 229154 | 17321743 ~ 17379119 (+) |
| LOC110507110 | LOC106581014 | coding | upstream | 286206 | 17293322 ~ 17321281 (+) |
| dcnl4 | dcnl5 | coding | upstream | 320332 | 17266189 ~ 17287155 (+) |
| LOC110507657 | LOC106581017 | coding | upstream | 347088 | 17247306 ~ 17260399 (+) |
| LOC110507114 | LOC106581006 | coding | downstream | 60074 | 17670454 ~ 17780391 (+) |
| LOC110507666 | LOC106581002 | coding | downstream | 175895 | 17786275 ~ 17814495 (+) |
| brip1 | brip1 | coding | downstream | 590416 | 18200796 ~ 18243226 (+) |
| LOC118944759 | NA | coding | downstream | 758883 | 18369263 ~ 18378985 (+) |
| LOC110507678 | LOC106612861 | coding | downstream | 1136815 | 18747195 ~ 18770034 (+) |
| G2057788 | NA | non-coding | upstream | 46772 | 17555504 ~ 17566384 (+) |
| G2057743 | LOC106581008 | non-coding | upstream | 55976 | 17550789 ~ 17551511 (+) |
| G2057784 | NA | non-coding | upstream | 58640 | 17548605 ~ 17548847 (+) |
| G2057783 | NA | non-coding | upstream | 59587 | 17547267 ~ 17547900 (+) |
| G2057771 | NA | non-coding | upstream | 78885 | 17528309 ~ 17528602 (+) |
| G2057825 | NA | non-coding | downstream | 13895 | 17624275 ~ 17624569 (+) |
| G2057839 | NA | non-coding | downstream | 39079 | 17649459 ~ 17649780 (+) |
| G2057854 | NA | non-coding | downstream | 58315 | 17668695 ~ 17669077 (+) |
| G2057902 | NA | non-coding | downstream | 153926 | 17764306 ~ 17764571 (+) |
| G2057943 | NA | non-coding | downstream | 259988 | 17870368 ~ 17870614 (+) |
| G2057804 | NA | other | upstream | 21563 | 17583970 ~ 17585924 (+) |
| G2057561 | NA | other | upstream | 390944 | 17213110 ~ 17219017 (+) |
| LOC110507087 | LOC106612902 | other | upstream | 1197118 | 16391021 ~ 16410705 (+) |
| G2056820 | NA | other | upstream | 1231444 | 16374266 ~ 16376043 (+) |
| G2057945 | NA | other | downstream | 263421 | 17873801 ~ 17875832 (+) |
| G2059435 | NA | other | downstream | 960719 | 18571099 ~ 18594842 (+) |
| G2059714 | NA | other | downstream | 1481567 | 19091947 ~ 19092272 (+) |
| G2059777 | LOC106581039 | other | downstream | 1583077 | 19193457 ~ 19195184 (+) |
| LOC110507725 | LOC106581066 | other | downstream | 2447863 | 20058224 ~ 20059968 (+) |
