G2057825


Basic Information

Item Value
gene id G2057825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17624275 ~ 17624569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2353498
CAGCGGAAactacacagtacacagtacacagcaTACACACCAGAAACTACACAGTACACGTACCCTGAACCCTAACACTCACAGTTTATGACGCATGAGGTGGAGAATGCAGGCAGTTGTTTACAGCCCATAGTCCAAAGTCAGGGTTTCCCAACTCCAAttgctgtcattgtcaagccaaacatccACCACATCCATGGTGATTTGATACAGTTTAGAATCCTATTAAACAATCTACAATCAATTCACTCTACAATCCATAATTATGTATTTCCATTAGCCAGGGTTACCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2353498 True 295 lncRNA 0.43 1 17624275 17624569

Neighbor

gene id symbol gene type direction distance location
si:dkey-56d12.4 NA coding upstream 140146 17481701 ~ 17484129 (+)
LOC110507111 LOC106581013 coding upstream 245942 17321743 ~ 17379119 (+)
LOC110507110 LOC106581014 coding upstream 302994 17293322 ~ 17321281 (+)
dcnl4 dcnl5 coding upstream 337120 17266189 ~ 17287155 (+)
LOC110507657 LOC106581017 coding upstream 363876 17247306 ~ 17260399 (+)
LOC110507114 LOC106581006 coding downstream 45885 17670454 ~ 17780391 (+)
LOC110507666 LOC106581002 coding downstream 161706 17786275 ~ 17814495 (+)
brip1 brip1 coding downstream 576227 18200796 ~ 18243226 (+)
LOC118944759 NA coding downstream 744694 18369263 ~ 18378985 (+)
LOC110507678 LOC106612861 coding downstream 1122626 18747195 ~ 18770034 (+)
G2057813 NA non-coding upstream 13895 17607487 ~ 17610380 (+)
G2057810 NA non-coding upstream 14557 17606062 ~ 17609718 (+)
G2057788 NA non-coding upstream 63560 17555504 ~ 17566384 (+)
G2057743 LOC106581008 non-coding upstream 72764 17550789 ~ 17551511 (+)
G2057784 NA non-coding upstream 75428 17548605 ~ 17548847 (+)
G2057839 NA non-coding downstream 24890 17649459 ~ 17649780 (+)
G2057854 NA non-coding downstream 44126 17668695 ~ 17669077 (+)
G2057902 NA non-coding downstream 139737 17764306 ~ 17764571 (+)
G2057943 NA non-coding downstream 245799 17870368 ~ 17870614 (+)
G2057950 NA non-coding downstream 259792 17884361 ~ 17884605 (+)
G2057804 NA other upstream 38351 17583970 ~ 17585924 (+)
G2057561 NA other upstream 407732 17213110 ~ 17219017 (+)
LOC110507087 LOC106612902 other upstream 1213906 16391021 ~ 16410705 (+)
G2056820 NA other upstream 1248232 16374266 ~ 16376043 (+)
G2057945 NA other downstream 249232 17873801 ~ 17875832 (+)
G2059435 NA other downstream 946530 18571099 ~ 18594842 (+)
G2059714 NA other downstream 1467378 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 1568888 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 2433674 20058224 ~ 20059968 (+)

Expression


Co-expression Network