G2057854


Basic Information

Item Value
gene id G2057854
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17668695 ~ 17669077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2353527
ctgtgaagggagtagtacacagcattgtacgagatcttcagtttcttggcaatttctcgcatggaatggccttcatttctcagaacaagaatagactgacaagtttcagaagaaagtgctttgtttcaagccattttgagcctgtaattgaacccacaaatgctgatgctccagatactcaactagtctaaagaaggcccgttttattgcttctttaatcagaataaccgttttcagctgtgctaacataatttcaaaagggttttctaatgaccaattagccttttaaaatgatcaacttggattaggtaacacaatgtgcctttggaacacaggagtgatagctgctgataatgggcctctgtacacctatgtagatattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2353527 True 383 lncRNA 0.39 1 17668695 17669077

Neighbor

gene id symbol gene type direction distance location
si:dkey-56d12.4 NA coding upstream 184566 17481701 ~ 17484129 (+)
LOC110507111 LOC106581013 coding upstream 290362 17321743 ~ 17379119 (+)
LOC110507110 LOC106581014 coding upstream 347414 17293322 ~ 17321281 (+)
dcnl4 dcnl5 coding upstream 381540 17266189 ~ 17287155 (+)
LOC110507657 LOC106581017 coding upstream 408296 17247306 ~ 17260399 (+)
LOC110507114 LOC106581006 coding downstream 1377 17670454 ~ 17780391 (+)
LOC110507666 LOC106581002 coding downstream 117198 17786275 ~ 17814495 (+)
brip1 brip1 coding downstream 531719 18200796 ~ 18243226 (+)
LOC118944759 NA coding downstream 700186 18369263 ~ 18378985 (+)
LOC110507678 LOC106612861 coding downstream 1078118 18747195 ~ 18770034 (+)
G2057839 NA non-coding upstream 18915 17649459 ~ 17649780 (+)
G2057825 NA non-coding upstream 44126 17624275 ~ 17624569 (+)
G2057813 NA non-coding upstream 58315 17607487 ~ 17610380 (+)
G2057810 NA non-coding upstream 58977 17606062 ~ 17609718 (+)
G2057788 NA non-coding upstream 107980 17555504 ~ 17566384 (+)
G2057902 NA non-coding downstream 95229 17764306 ~ 17764571 (+)
G2057943 NA non-coding downstream 201291 17870368 ~ 17870614 (+)
G2057950 NA non-coding downstream 215284 17884361 ~ 17884605 (+)
G2057958 NA non-coding downstream 229490 17898567 ~ 17900322 (+)
G2057960 NA non-coding downstream 234154 17903231 ~ 17903470 (+)
G2057804 NA other upstream 82771 17583970 ~ 17585924 (+)
G2057561 NA other upstream 452152 17213110 ~ 17219017 (+)
LOC110507087 LOC106612902 other upstream 1258326 16391021 ~ 16410705 (+)
G2056820 NA other upstream 1292652 16374266 ~ 16376043 (+)
G2057945 NA other downstream 204724 17873801 ~ 17875832 (+)
G2059435 NA other downstream 902022 18571099 ~ 18594842 (+)
G2059714 NA other downstream 1422870 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 1524380 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 2389166 20058224 ~ 20059968 (+)

Expression


Co-expression Network