G2057958


Basic Information

Item Value
gene id G2057958
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17898567 ~ 17900322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2353639
TTCAGGCTAAGGATAGGGTTAGTGCTGTGGTTGTAGAAGATTCaggctaaggttaggtttagtgcTGTGGTTGTAGGAGATtcaggctaaggttagggttagtgctgtggttgtagaagattcaggctaaggttagggttgttGCTGAGGTTGTAGAAGATTCAGGCtaaggttagtgttagtgttgtgGTTGTAGAAGATTCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2353639 True 207 lncRNA 0.44 2 17898567 17900322

Neighbor

gene id symbol gene type direction distance location
LOC110507666 LOC106581002 coding upstream 84072 17786275 ~ 17814495 (+)
LOC110507114 LOC106581006 coding upstream 118176 17670454 ~ 17780391 (+)
si:dkey-56d12.4 NA coding upstream 414438 17481701 ~ 17484129 (+)
LOC110507111 LOC106581013 coding upstream 520234 17321743 ~ 17379119 (+)
LOC110507110 LOC106581014 coding upstream 577286 17293322 ~ 17321281 (+)
brip1 brip1 coding downstream 300474 18200796 ~ 18243226 (+)
LOC118944759 NA coding downstream 468941 18369263 ~ 18378985 (+)
LOC110507678 LOC106612861 coding downstream 846873 18747195 ~ 18770034 (+)
LOC110507679 ripl1 coding downstream 870504 18770826 ~ 18789238 (+)
LOC110507680 LOC106581030 coding downstream 889230 18789552 ~ 18796852 (+)
G2057950 NA non-coding upstream 13962 17884361 ~ 17884605 (+)
G2057943 NA non-coding upstream 27953 17870368 ~ 17870614 (+)
G2057902 NA non-coding upstream 133996 17764306 ~ 17764571 (+)
G2057854 NA non-coding upstream 229490 17668695 ~ 17669077 (+)
G2057839 NA non-coding upstream 248787 17649459 ~ 17649780 (+)
G2057960 NA non-coding downstream 2909 17903231 ~ 17903470 (+)
G2057962 NA non-coding downstream 3792 17904114 ~ 17904324 (+)
G2058698 NA non-coding downstream 9653 17909975 ~ 17910407 (+)
G2058701 NA non-coding downstream 11135 17911457 ~ 17912019 (+)
G2058703 NA non-coding downstream 12135 17912457 ~ 17912717 (+)
G2057945 NA other upstream 22735 17873801 ~ 17875832 (+)
G2057804 NA other upstream 312643 17583970 ~ 17585924 (+)
G2057788 NA other upstream 332183 17555504 ~ 17566384 (+)
G2057561 NA other upstream 682024 17213110 ~ 17219017 (+)
LOC110507087 LOC106612902 other upstream 1488198 16391021 ~ 16410705 (+)
G2059435 NA other downstream 670777 18571099 ~ 18594842 (+)
G2059714 NA other downstream 1191625 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 1293135 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 2157921 20058224 ~ 20059968 (+)
G2061226 NA other downstream 2405060 20305382 ~ 20306608 (+)

Expression


Co-expression Network