G2058906



Basic Information


Item Value
gene id G2058906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17951256 ~ 17952247 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2354705
aaaatagaactgtttggccataatgaccatcgttatgtttggaggaaaaagggggatgcttgcaagccgaagaacaccatcccgaccgtgaagcacgggggtggcagcatcatgttgtgtgggtgctttactgcaggagggactggtgcacttcacaaaattgatcgcatcatgaggatggaaaattatgtggatatattgaagcaatatctcaagacatcagttaaagttaaagcttggtcgcaaatgggtcttccaaatgggcaataaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaagtccctgacctcaatcctaaataaaatttgtgggcagaactgaaaaagcgtgtgcgagcaaggaggcctagaaacatgacacagttacaccagctctgtcaggaggaatgggccaacattcacccaacttgttgtgggaagcttgtggaaggctatccgaaacgtttgacccacgttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacgcactgggaatgtgatgaaagaaataaaagctgaaataaataattctctctactattaattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaagacagggaatttttactaggattaaacatcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttccaacttcaactctgTTTAAAATTAAGAAGCTTGGATATCATGTTGTTTTGGGCTCTTACTTTGTTCATTCATCAGTTTGttatttataaaattgtacaCCCTCTTTCTTCCCGCACGTAGCCCATAATATACTTGTTCCCCACATATCATATATCTGCCCTGATGTGCTAGGTGTTTGTTCTTCTTGTCAAAGTGCCTGATTAAAGTACTTATGTGAAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2354705 True 992 lncRNA 0.40 1 17951256 17952247
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110507670 LOC106612869 coding downstream 68783 17873784 ~ 17882473 (-)
LOC110507669 LOC106581001 coding downstream 81902 17859626 ~ 17869354 (-)
LOC110507668 LOC106581003 coding downstream 94138 17814362 ~ 17857118 (-)
LOC110507665 LOC106581007 coding downstream 307111 17625270 ~ 17644145 (-)
LOC110507664 LOC106581008 coding downstream 330260 17549449 ~ 17620996 (-)
LOC110507672 LOC106580990 coding upstream 2415 17954662 ~ 18145324 (-)
LOC118944641 NA coding upstream 237982 18190229 ~ 18192762 (-)
LOC110507675 LOC106580997 coding upstream 359331 18311578 ~ 18340616 (-)
LOC110507676 LOC106580995 coding upstream 406653 18358900 ~ 18369228 (-)
LOC110507115 bcas3 coding upstream 426520 18378767 ~ 18731911 (-)
G2058904 NA non-coding downstream 1017 17949914 ~ 17950239 (-)
G2058892 NA non-coding downstream 15048 17934885 ~ 17936208 (-)
G2058887 NA non-coding downstream 22378 17928619 ~ 17928878 (-)
G2058723 NA non-coding downstream 28954 17922102 ~ 17922302 (-)
G2058716 NA non-coding downstream 32375 17918640 ~ 17918881 (-)
G2058935 NA non-coding upstream 44674 17996921 ~ 17997647 (-)
G2058944 NA non-coding upstream 66588 18018835 ~ 18019128 (-)
G2058952 NA non-coding upstream 79040 18031287 ~ 18031559 (-)
G2058957 NA non-coding upstream 82967 18035214 ~ 18035470 (-)
G2059001 NA non-coding upstream 137472 18089719 ~ 18089928 (-)
G2058724 NA other downstream 28504 17922342 ~ 17922752 (-)
LOC110507661 LOC106581010 other downstream 481435 17464437 ~ 17481646 (-)
LOC110507646 LOC106612894 other downstream 951471 16756597 ~ 17064214 (-)
G2056115 NA other downstream 2574741 15376215 ~ 15376515 (-)
LOC110507082 LOC106580920 other downstream 3416016 14532256 ~ 14719525 (-)
LOC110507754 LOC106581192 other upstream 2961867 20913520 ~ 20924130 (-)
LOC110507765 dynll2a other upstream 3317920 21270167 ~ 21273576 (-)
LOC110507126 kiaa0100 other upstream 3345418 21295518 ~ 21311437 (-)
LOC110507789 LOC106581159 other upstream 4760416 22712654 ~ 22718153 (-)
zbtb16b LOC106581153 other upstream 4852011 22780311 ~ 22808183 (-)

Expression


G2058906 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G2058906 Expression in each Bioproject

Bar chart with 19 bars.
G2058906 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network